RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 DAP3P51398 398 aaKnown RBP12.47□□□□□ -0.41
MSH5-202ENST00000375740 ART1P52961 327 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 MFGE8Q08431 387 aaPredicted RBP12.47□□□□□ -0.41
MSH5-202ENST00000375740 SCRN3Q0VDG4 424 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 IL11RAQ14626 422 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 PLPPR5Q32ZL2 321 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 MAML2Q8IZL2 1156 aaPredicted RBP12.47□□□□□ -0.41
MSH5-202ENST00000375740 SLC22A8Q8TCC7 542 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 RASL10BQ96S79 203 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 KCNK17Q96T54 332 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 WIF1Q9Y5W5 379 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 RALGAPA1Q6GYQ0 2036 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 IGKV1D-43A0A0B4J1Z2 117 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 PYCARD-AS1I3L0S3 204 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 ETV2O00321 342 aaPredicted RBP12.47□□□□□ -0.41
MSH5-202ENST00000375740 PTH2RP49190 550 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 RIDAP52758 137 aaKnown RBP12.47□□□□□ -0.41
MSH5-202ENST00000375740 FOXK1P85037 733 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 ZNF528Q3MIS6 628 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 LDLRAD3Q86YD5 345 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 PUSL1Q8N0Z8 303 aaKnown RBP12.47□□□□□ -0.41
MSH5-202ENST00000375740 ZFP82Q8N141 532 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 SLC26A10Q8NG04 563 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 OR52N5Q8NH56 324 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 PNPLA2Q96AD5 504 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 MRGPRX4Q96LA9 322 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 WDR13Q9H1Z4 485 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 BARX1Q9HBU1 254 aaPredicted RBP12.47□□□□□ -0.41
MSH5-202ENST00000375740 KCNK7Q9Y2U2 307 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 LRP12Q9Y561 859 aa12.47□□□□□ -0.41
MSH5-202ENST00000375740 IGLV3-32A0A0A0MS00 114 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 KHDRBS3O75525 346 aaKnown RBP12.46□□□□□ -0.41
MSH5-202ENST00000375740 APOC1P02654 83 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 RAB40ALP0C0E4 278 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 CCL4P13236 92 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 ZNF823P16415 610 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 PLA2G7Q13093 441 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 GUCA2BQ16661 112 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 SLC25A53Q5H9E4 307 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 NANPQ8TBE9 248 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 ELP5Q8TE02 316 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 RAB40AQ8WXH6 277 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 MIB2Q96AX9 1013 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 EMC6Q9BV81 110 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 GPN3Q9UHW5 284 aaPredicted RBP12.46□□□□□ -0.41
MSH5-202ENST00000375740 HMSDA8MTL9 139 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 CELA2AP08217 269 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 CDK2P24941 298 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 MYBPHQ13203 477 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 PCOLCEQ15113 449 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 TMEM69Q5SWH9 247 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 CATSPERDQ86XM0 798 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 LINC00346Q8IVM7 164 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 OR2M3Q8NG83 312 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 OR4D10Q8NGI6 311 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 HAVCR1Q96D42 359 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 SPACA9Q96E40 222 aaPredicted RBP12.46□□□□□ -0.41
MSH5-202ENST00000375740 PLEKHA1Q9HB21 404 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 ZNF275Q9NSD4 429 aaPredicted RBP12.46□□□□□ -0.41
MSH5-202ENST00000375740 ALKBH4Q9NXW9 302 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 NDRG3Q9UGV2 375 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 ETV7Q9Y603 341 aa12.46□□□□□ -0.41
MSH5-202ENST00000375740 GABARAPH6UMI1 98 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 NTN3O00634 580 aaPredicted RBP12.45□□□□□ -0.42
MSH5-202ENST00000375740 DKK1O94907 266 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 TMIGD3P0DMS9 266 aaPredicted RBP12.45□□□□□ -0.42
MSH5-202ENST00000375740 MPGP29372 298 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 BIDP55957 195 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 S100A12P80511 92 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 SORDQ00796 357 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 PEAR1Q5VY43 1037 aaPredicted RBP12.45□□□□□ -0.42
MSH5-202ENST00000375740 DNM1P34Q6PK57 102 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 NDUFAF7Q7L592 441 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 DEFB123Q8N688 67 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 FCAMRQ8WWV6 532 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 TMEM185BQ9H7F4 350 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 WDR54Q9H977 334 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 SERINC1Q9NRX5 453 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 SLC39A1Q9NY26 324 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 STEAP1Q9UHE8 339 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 FBXL3Q9UKT7 428 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 B3GALT5Q9Y2C3 310 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 WDR87Q6ZQQ6 2873 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 GOSR2O14653 212 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 SULT1B1O43704 296 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 F12P00748 615 aaPredicted RBP12.45□□□□□ -0.42
MSH5-202ENST00000375740 KLK3P07288 261 aaPredicted RBP12.45□□□□□ -0.42
MSH5-202ENST00000375740 CSRP1P21291 193 aaKnown RBP12.45□□□□□ -0.42
MSH5-202ENST00000375740 ZXDAP98168 799 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 DCXRQ7Z4W1 244 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 ZNF227Q86WZ6 799 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 GLB1L2Q8IW92 636 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 MR1Q95460 341 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 CMKLR1Q99788 373 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 MFFQ9GZY8 342 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 KLHL9Q9P2J3 617 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 B3GALT1Q9Y5Z6 326 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 NPIPB13A6NJU9 1138 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 NPIPB4C9JG80 1138 aa12.45□□□□□ -0.42
MSH5-202ENST00000375740 DOK2O60496 412 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms