RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 TMEM200CA6NKL6 621 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 TTLL8A6PVC2 850 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 K7ESF4 209 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 ZNF208O43345 1280 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 IL33O95760 270 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 CXCL12P48061 93 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 RPL27P61353 136 aaKnown RBP12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 HHEXQ03014 270 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 ROM1Q03395 351 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 FZD2Q14332 565 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 KCTD18Q6PI47 426 aaPredicted RBP12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 LINC00346Q8IVM7 164 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 FAM219AQ8IW50 185 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 UBALD2Q8IYN6 164 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 PTPMT1Q8WUK0 201 aaPredicted RBP12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 THRSPQ92748 146 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 CYYR1Q96J86 154 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 ZC3H10Q96K80 434 aaKnown RBP12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 GAL3ST4Q96RP7 486 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 TLNRD1Q9H1K6 362 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 PRODH2Q9UF12 536 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 GDF2Q9UK05 429 aaPredicted RBP12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 KLF2Q9Y5W3 355 aaPredicted RBP12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 ARID1AO14497 2285 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 LOC107986453A0A1B0GWG9 222 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 STK17BO94768 372 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 H2AFB1P0C5Y9 115 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 HRH1P35367 487 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 SLC37A1P57057 533 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 SCRN3Q0VDG4 424 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 GPBAR1Q8TDU6 330 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 ROBO4Q8WZ75 1007 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 AQP3Q92482 292 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 PHB2Q99623 299 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 FN3KRPQ9HA64 309 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 NDRG3Q9UGV2 375 aa12.62□□□□□ -0.39
CLCNKA-202ENST00000375692 A0A0B4J2A0 478 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 SPTY2D1-AS1A0A0U1RR47 76 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 METTL12A8MUP2 240 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 F8W036 122 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 RAB27BO00194 218 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 P2RY10O00398 339 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 TNFP01375 233 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 YPEL5P62699 121 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 BLOC1S1P78537 153 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 ZNF260Q3ZCT1 412 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 SVBPQ8N300 66 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 ZNF519Q8TB69 540 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 MAP3K3Q99759 626 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 PRRT1Q99946 306 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 OR11A1Q9GZK7 315 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 ESRP2Q9H6T0 727 aaKnown RBP12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 CNTD2Q9H8S5 307 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 SHPKQ9UHJ6 478 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 HHLA2Q9UM44 414 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 CSAG2Q9Y5P2 127 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 TECTAO75443 2155 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 TRAV36DV7A0A075B6V5 113 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 RAB19A4D1S5 217 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 FAM221BA6H8Z2 402 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 EFSO43281 561 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 IL2RAP01589 272 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 HLA-DOBP13765 273 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 GNB3P16520 340 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 PPICP45877 212 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 RABIFP47224 123 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 MEF2DQ14814 521 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 CCDC157Q569K6 752 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 UQCC3Q6UW78 93 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 MAMDC2Q7Z304 686 aaPredicted RBP12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 PAQR4Q8N4S7 273 aaPredicted RBP12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 TMED6Q8WW62 240 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 DCUN1D4Q92564 292 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 FOXRED1Q96CU9 486 aaPredicted RBP12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 RRNAD1Q96FB5 475 aaKnown RBP12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 PIK3IP1Q96FE7 263 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 PRR13Q9NZ81 148 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 CYB5R1Q9UHQ9 305 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 MKL2Q9ULH7 1088 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 KCNK7Q9Y2U2 307 aa12.61□□□□□ -0.39
CLCNKA-202ENST00000375692 SPAG17Q6Q759 2223 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 EIF1AYO14602 144 aaKnown RBP12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 PMP2P02689 132 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 HLA-GP17693 338 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 FSTP19883 344 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 PVALBP20472 110 aaPredicted RBP12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 SERPINF1P36955 418 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 ZNF813Q6ZN06 617 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 BHLHE23Q8NDY6 225 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 OR52N5Q8NH56 324 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 ELP5Q8TE02 316 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 FGGYQ96C11 551 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 KLHDC7BQ96G42 594 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 G6PC2Q9NQR9 355 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 ZNF629Q9UEG4 869 aaPredicted RBP12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 OR52A1Q9UKL2 312 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 RP1P56715 2156 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 B4DGG1 531 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 FGF16O43320 207 aa12.6□□□□□ -0.39
CLCNKA-202ENST00000375692 CD37P11049 281 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms