RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 HEXAP06865 529 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 HOXB2P14652 356 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 PJVKQ0ZLH3 352 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 TOMM34Q15785 309 aaPredicted RBP18.91■□□□□ 0.62
UPF3A-202ENST00000375299 ARMC6Q6NXE6 501 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 C7orf61Q8IZ16 206 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 ZSCAN4Q8NAM6 433 aaPredicted RBP18.91■□□□□ 0.62
UPF3A-202ENST00000375299 RRNAD1Q96FB5 475 aaKnown RBP18.91■□□□□ 0.62
UPF3A-202ENST00000375299 CMSS1Q9BQ75 279 aaKnown RBP18.91■□□□□ 0.62
UPF3A-202ENST00000375299 TXNIPQ9H3M7 391 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 CNTD2Q9H8S5 307 aa18.91■□□□□ 0.62
UPF3A-202ENST00000375299 C17orf105B2RV13 164 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 PRSS44E7EML9 344 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 CRYBA1P05813 215 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 FAM157CP0CG43 387 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 NR0B1P51843 470 aaKnown RBP18.9■□□□□ 0.62
UPF3A-202ENST00000375299 HSD17B7P56937 341 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 TAS2R31P59538 309 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 MST1LQ2TV78 715 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 DRAM2Q6UX65 266 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 ZNF321PQ8N8H1 164 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 ZNF784Q8NCA9 323 aaPredicted RBP18.9■□□□□ 0.62
UPF3A-202ENST00000375299 RTN4RQ9BZR6 473 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 HCRTR2O43614 444 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 NSA2O95478 260 aaKnown RBP18.9■□□□□ 0.62
UPF3A-202ENST00000375299 MT-ATP6P00846 226 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 IFNA6P05013 189 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 IFNA4P05014 189 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 CYCSP99999 105 aaKnown RBP18.9■□□□□ 0.62
UPF3A-202ENST00000375299 UNC119Q13432 240 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 TMPPEQ6ZT21 453 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 RXFP4Q8TDU9 374 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 TMEM106CQ9BVX2 250 aa18.9■□□□□ 0.62
UPF3A-202ENST00000375299 PDZK1IP1Q13113 114 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 ZNF704Q6ZNC4 412 aaPredicted RBP18.89■□□□□ 0.61
UPF3A-202ENST00000375299 DTWD2Q8NBA8 298 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 GPBAR1Q8TDU6 330 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 C2CD4CQ8TF44 421 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 ADOQ96SZ5 270 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 TCEAL2Q9H3H9 227 aaPredicted RBP18.89■□□□□ 0.61
UPF3A-202ENST00000375299 FBRSQ9HAH7 460 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 LHX6Q9UPM6 363 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 COA3Q9Y2R0 106 aaPredicted RBP18.89■□□□□ 0.61
UPF3A-202ENST00000375299 FREM3P0C091 2139 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 KIR2DS5A0A0G2JLQ3 304 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 A0A0G2JNG1 304 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 H0YIZ8 118 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 KIR2DS3K7RE56 304 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 ICOSLGO75144 302 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 MPZL1O95297 269 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 KLF8O95600 359 aaPredicted RBP18.89■□□□□ 0.61
UPF3A-202ENST00000375299 TBPP20226 339 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 GALNSP34059 522 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 KCNJ3P48549 501 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 SLC37A1P57057 533 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 KIR2DS5Q14953 304 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 METTL27Q8N6F8 245 aaPredicted RBP18.89■□□□□ 0.61
UPF3A-202ENST00000375299 MARCH1Q8TCQ1 289 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 ZC3H10Q96K80 434 aaKnown RBP18.89■□□□□ 0.61
UPF3A-202ENST00000375299 ACKR4Q9NPB9 350 aa18.89■□□□□ 0.61
UPF3A-202ENST00000375299 ZNF705EA8MWA4 302 aaPredicted RBP18.88■□□□□ 0.61
UPF3A-202ENST00000375299 LINC01565O15544 149 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 GLO1Q04760 184 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 ZP2Q05996 745 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 TMEM244Q5VVB8 128 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 SKA3Q8IX90 412 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 PRR22Q8IZ63 422 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 SFT2D1Q8WV19 159 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 MMABQ96EY8 250 aaPredicted RBP18.88■□□□□ 0.61
UPF3A-202ENST00000375299 NRIP2Q9BQI9 281 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 MEX3AA1L020 520 aaKnown RBP18.88■□□□□ 0.61
UPF3A-202ENST00000375299 P2RY10O00398 339 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 TNFP01375 233 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 PMP2P02689 132 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 CELA2BP08218 269 aaPredicted RBP18.88■□□□□ 0.61
UPF3A-202ENST00000375299 GNB3P16520 340 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 GFOD2Q3B7J2 385 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 HOGA1Q86XE5 327 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 OR10R2Q8NGX6 335 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 UQCC2Q9BRT2 126 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 LPAR3Q9UBY5 353 aa18.88■□□□□ 0.61
UPF3A-202ENST00000375299 C17orf51A8MQB3 221 aa18.87■□□□□ 0.61
UPF3A-202ENST00000375299 IGHMP01871 453 aa18.87■□□□□ 0.61
UPF3A-202ENST00000375299 NFYBP25208 207 aa18.87■□□□□ 0.61
UPF3A-202ENST00000375299 CRABP1P29762 137 aa18.87■□□□□ 0.61
UPF3A-202ENST00000375299 SLC6A9P48067 706 aa18.87■□□□□ 0.61
UPF3A-202ENST00000375299 YPEL5P62699 121 aa18.87■□□□□ 0.61
UPF3A-202ENST00000375299 QRFPP83859 136 aa18.87■□□□□ 0.61
UPF3A-202ENST00000375299 Q6ZSR6 202 aa18.87■□□□□ 0.61
UPF3A-202ENST00000375299 RCC2Q9P258 522 aaKnown RBP18.87■□□□□ 0.61
UPF3A-202ENST00000375299 LOC101059948A0A1B0GTJ6 334 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 TMEM269A0A1B0GVZ9 245 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 DXOO77932 396 aaKnown RBP18.86■□□□□ 0.61
UPF3A-202ENST00000375299 WISP1O95388 367 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 BPNT1O95861 308 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 ZFP82Q8N141 532 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 FAM96BQ9Y3D0 163 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 FRG2CA6NGY1 282 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 MSGN1A6NI15 193 aa18.86■□□□□ 0.61
UPF3A-202ENST00000375299 SSX5O60225 188 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms