RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 OR4S1Q8NGB4 309 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 C2CD4CQ8TF44 421 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 MR1Q95460 341 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 NGBQ9NPG2 151 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 OR14J1Q9UGF5 321 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 V9GYH0 126 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 ANKRD20A5PA0PJZ0 165 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 HEPACAM2A8MVW5 462 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 SNCGO76070 127 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 VASPP50552 380 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-204ENST00000375290 SNU13P55769 128 aaKnown RBP9.28□□□□□ -0.92
PTCH1-204ENST00000375290 C2orf76Q3KRA6 126 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 IP6K3Q96PC2 410 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 PRR14Q9BWN1 585 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 FLVCR2Q9UPI3 526 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 DOCK1Q14185 1865 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 INHBBP09529 407 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 PCBP3P57721 371 aaKnown RBP9.28□□□□□ -0.92
PTCH1-204ENST00000375290 TLE1Q04724 770 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 OR4D6Q8NGJ1 314 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 FBLIM1Q8WUP2 373 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 SBK3P0C264 359 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 PGGT1BP53609 377 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 DGAT2L6Q6ZPD8 337 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 PLPP7Q8NBV4 271 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 GJD2Q9UKL4 321 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 IGHA1P01876 353 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 RAD52P43351 418 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 IER5LQ5T953 404 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 KMT5CQ86Y97 462 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 LHX4Q969G2 390 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 SDSLQ96GA7 329 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 LPAR3Q9UBY5 353 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 ABLIM3O94929 683 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 UTS2O95399 124 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 CD3DP04234 171 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 RAC1P63000 192 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 JAG1P78504 1218 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 H2BFWTQ7Z2G1 175 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 ABHD14BQ96IU4 210 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 MRGPRX4Q96LA9 322 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 TOX2Q96NM4 488 aa9.28□□□□□ -0.92
PTCH1-204ENST00000375290 TMED7-TICAM2A0A0A6YYA0 188 aa9.27□□□□□ -0.92
PTCH1-204ENST00000375290 MRPL33O75394 65 aaKnown RBP9.27□□□□□ -0.92
PTCH1-204ENST00000375290 HIST1H1CP16403 213 aaKnown RBP9.27□□□□□ -0.92
PTCH1-204ENST00000375290 PPICP45877 212 aa9.27□□□□□ -0.92
PTCH1-204ENST00000375290 LIM2P55344 173 aa9.27□□□□□ -0.92
PTCH1-204ENST00000375290 HABP2Q14520 560 aaPredicted RBP9.27□□□□□ -0.92
PTCH1-204ENST00000375290 TMEM204Q9BSN7 226 aa9.27□□□□□ -0.92
PTCH1-204ENST00000375290 UCK1Q9HA47 277 aa9.27□□□□□ -0.92
PTCH1-204ENST00000375290 TMED7Q9Y3B3 224 aa9.27□□□□□ -0.92
PTCH1-204ENST00000375290 A0A1B0GV50 99 aa9.27□□□□□ -0.92
PTCH1-204ENST00000375290 H3BSH0 61 aa9.27□□□□□ -0.92
PTCH1-204ENST00000375290 HRO43593 1189 aa9.27□□□□□ -0.92
PTCH1-204ENST00000375290 CHST11Q9NPF2 352 aa9.27□□□□□ -0.92
PTCH1-204ENST00000375290 BSGP35613 385 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 PCBP4P57723 403 aaKnown RBP9.27□□□□□ -0.93
PTCH1-204ENST00000375290 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.27□□□□□ -0.93
PTCH1-204ENST00000375290 TMEM81Q6P7N7 255 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 SLC35G3Q8N808 338 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 SECTM1Q8WVN6 248 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 KLK6Q92876 244 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 COL16A1Q07092 1604 aaPredicted RBP9.27□□□□□ -0.93
PTCH1-204ENST00000375290 H0YGG7 62 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 MPC2O95563 127 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 F13BP05160 661 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 HRH1P35367 487 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 OR8B8Q15620 311 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 LINC00303Q3SY05 128 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 DCXRQ7Z4W1 244 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 ZNF687Q8N1G0 1237 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 OR2G2Q8NGZ5 317 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 AUNIPQ9H7T9 357 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 CACNG4Q9UBN1 327 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 WSB1Q9Y6I7 421 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 ZNF814B7Z6K7 855 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 PHOX2AO14813 284 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 PNLIPRP2P54317 469 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 OR2B8PP59922 312 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 GPR119Q8TDV5 335 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 TRAPPC2LQ9UL33 140 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 HLA-DQB1P01920 261 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 ZNF90Q03938 601 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 CPEB3Q8NE35 698 aaKnown RBP9.27□□□□□ -0.93
PTCH1-204ENST00000375290 DMBX1Q8NFW5 382 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 ZNRF4Q8WWF5 429 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 RTN4IP1Q8WWV3 396 aaPredicted RBP9.27□□□□□ -0.93
PTCH1-204ENST00000375290 MRGPRX3Q96LB0 322 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 PDCD1LG2Q9BQ51 273 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 MBTPS2O43462 519 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 GLB1P16278 677 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 CLDN12P56749 244 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 KCNE4Q8WWG9 221 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 BTAF1O14981 1849 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.93
PTCH1-204ENST00000375290 THBS4P35443 961 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 HNRNPA3P51991 378 aaKnown RBP9.27□□□□□ -0.93
PTCH1-204ENST00000375290 NAXEQ8NCW5 288 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 OR4C5Q8NGB2 326 aa9.27□□□□□ -0.93
PTCH1-204ENST00000375290 AKR7LQ8NHP1 331 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms