RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ELP5Q8TE02 316 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 MITD1Q8WV92 249 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 PIK3IP1Q96FE7 263 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 LRRC61Q9BV99 259 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 NUDT9Q9BW91 350 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 SEMA6CQ9H3T2 930 aa9.94□□□□□ -0.82
CCDC40-203ENST00000374877 MRPS33Q9Y291 106 aaKnown RBP9.94□□□□□ -0.82
CCDC40-203ENST00000374877 HSPB2A8KAH6 182 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF264O43296 627 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 NUDT14O95848 222 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 GUSBP08236 651 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 SKP2Q13309 424 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 HSPB2Q16082 182 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 GKN2Q86XP6 184 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 LIPHQ8WWY8 451 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 NECAB3Q96P71 396 aaPredicted RBP9.93□□□□□ -0.82
CCDC40-203ENST00000374877 UBQLN4Q9NRR5 601 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 CTSFQ9UBX1 484 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 EMC9Q9Y3B6 208 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 NUP210LQ5VU65 1888 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 SNAPINO95295 136 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 FREM3P0C091 2139 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 ST6GAL1P15907 406 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 PSMB6P28072 239 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 SERPINF1P36955 418 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF528Q3MIS6 628 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 KCTD18Q6PI47 426 aaPredicted RBP9.93□□□□□ -0.82
CCDC40-203ENST00000374877 BAP18Q8IXM2 172 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 OR1M1Q8NGA1 313 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 RNF141Q8WVD5 230 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 ASB17Q8WXJ9 295 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 COA4Q9NYJ1 87 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 LRP12Q9Y561 859 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 C17orf51A8MQB3 221 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 CLDN4O14493 209 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 EIF1AYO14602 144 aaKnown RBP9.93□□□□□ -0.82
CCDC40-203ENST00000374877 BCAT2O15382 392 aaPredicted RBP9.93□□□□□ -0.82
CCDC40-203ENST00000374877 IFNA6P05013 189 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 CRYBA1P05813 215 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 HRH1P35367 487 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 EIF1AXP47813 144 aaKnown RBP9.93□□□□□ -0.82
CCDC40-203ENST00000374877 MEOX2P50222 304 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 AFF3P51826 1226 aaKnown RBP9.93□□□□□ -0.82
CCDC40-203ENST00000374877 PNLIPRP2P54317 469 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 PDZK1IP1Q13113 114 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 AKIRIN2Q53H80 203 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 DHRS7BQ6IAN0 325 aaPredicted RBP9.93□□□□□ -0.82
CCDC40-203ENST00000374877 FDX2Q6P4F2 183 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF813Q6ZN06 617 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 C1orf210Q8IVY1 113 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 PRR22Q8IZ63 422 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 OR4D6Q8NGJ1 314 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 ABHD6Q9BV23 337 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 HRH4Q9H3N8 390 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 OR2S2Q9NQN1 319 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 FAM96BQ9Y3D0 163 aa9.93□□□□□ -0.82
CCDC40-203ENST00000374877 METTL21EPA6NDL7 271 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 LMX1BO60663 402 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 CRHP06850 196 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 CXCR1P25024 350 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 NFYBP25208 207 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 HNRNPKP61978 463 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC40-203ENST00000374877 ACKR1Q16570 336 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC40-203ENST00000374877 PMS2CLQ68D20 193 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 TMPPEQ6ZT21 453 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 MRGPRFQ96AM1 343 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 FANCFQ9NPI8 374 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 ZFP57Q9NU63 452 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 MRPL22Q9NWU5 206 aaKnown RBP9.92□□□□□ -0.82
CCDC40-203ENST00000374877 HHLA2Q9UM44 414 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 PRSS44E7EML9 344 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 LINC01387J3KSC0 135 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 FGF16O43320 207 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 HCRTR2O43614 444 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 APOC1P02654 83 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 CTLA4P16410 223 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 GPR85P60893 370 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 SWI5Q1ZZU3 235 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 ZNF542PQ5EBM4 170 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 TEX30Q5JUR7 227 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 AVPI1Q5T686 147 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 LYSMD4Q5XG99 296 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 MAML2Q8IZL2 1156 aaPredicted RBP9.92□□□□□ -0.82
CCDC40-203ENST00000374877 OR4A4PQ8NGN8 299 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 CCNL2Q96S94 520 aaPredicted RBP9.92□□□□□ -0.82
CCDC40-203ENST00000374877 UCK1Q9HA47 277 aa9.92□□□□□ -0.82
CCDC40-203ENST00000374877 LOC107986453A0A1B0GWG9 222 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 PRSS37A4D1T9 235 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 TTLL8A6PVC2 850 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 MPZL1O95297 269 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 PPICP45877 212 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 FAM219AQ8IW50 185 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 RXFP4Q8TDU9 374 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 GLYATL2Q8WU03 294 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 ADOQ96SZ5 270 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 SUSD2Q9UGT4 822 aa9.91□□□□□ -0.82
CCDC40-203ENST00000374877 GDF2Q9UK05 429 aaPredicted RBP9.91□□□□□ -0.82
CCDC40-203ENST00000374877 MEGF11A6BM72 1044 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms