RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CBLN3Q6UW01 205 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 C5orf46Q6UWT4 87 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 IL20RBQ6UXL0 311 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 APOOLQ6UXV4 268 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 FAM220AQ7Z4H9 259 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 NANOGNBQ7Z5D8 188 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 NOXA1Q86UR1 476 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 C9orf40Q8IXQ3 194 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 TIGD4Q8IY51 512 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 ZNF321PQ8N8H1 164 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 ZNF441Q8N8Z8 693 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 LSM14AQ8ND56 463 aaKnown RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 OR51L1Q8NGJ5 315 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 OR13C5Q8NGS8 318 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 OR6K6Q8NGW6 343 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 OR2T4Q8NH00 348 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 OR1L3Q8NH93 324 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 ZPLD1Q8TCW7 415 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 SMAP2Q8WU79 429 aaPredicted RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 ZNRF4Q8WWF5 429 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 CAPSLQ8WWF8 208 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 DNASE2BQ8WZ79 361 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 RGP1Q92546 391 aaPredicted RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 THRSPQ92748 146 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 DAZLQ92904 295 aaKnown RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 TSLPQ969D9 159 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 YIPF5Q969M3 257 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 UPRTQ96BW1 309 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 SLC41A2Q96JW4 573 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 Q96M85 177 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 DERL3Q96Q80 235 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 TSPAN32Q96QS1 320 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 LPAR4Q99677 370 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 TMEM204Q9BSN7 226 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 ALG12Q9BV10 488 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 NUDT9Q9BW91 350 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 OR8D2Q9GZM6 311 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 WWTR1Q9GZV5 400 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 UBE2ZQ9H832 354 aaPredicted RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 NIPAL2Q9H841 368 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 PLEKHA1Q9HB21 404 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 KLHL1Q9NR64 748 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 PNO1Q9NRX1 252 aaKnown RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 ZNF275Q9NSD4 429 aaPredicted RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 DDX28Q9NUL7 540 aaKnown RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 COPZ2Q9P299 210 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 NLKQ9UBE8 527 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 COPS7AQ9UBW8 275 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 NUFIP1Q9UHK0 495 aaKnown RBP4.25□□□□□ -1.73
USP48-202ENST00000374730 TEKT2Q9UIF3 430 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 GNG8Q9UK08 70 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 CAMK2AQ9UQM7 478 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 NUBP2Q9Y5Y2 271 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 CACNG2Q9Y698 323 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 CLCA3PQ9Y6N3 262 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 CABIN1Q9Y6J0 2220 aa4.25□□□□□ -1.73
USP48-202ENST00000374730 PI4KAP42356 2102 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 IGLV3-12A0A075B6K2 115 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 TRBV5-5A0A0J9YX44 114 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 A0A1B0GX78 115 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 OR6C70A6NIJ9 312 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 IFITM5A6NNB3 132 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 A6NNC1 897 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 A8MU76 341 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 A8MUA0 341 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 PRR32B1ATL7 298 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 INMT-MINDY4F8WBC2 141 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 BLOC1S5-TXNDC5H3BN57 136 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 AIPO00170 330 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 TOX3O15405 576 aaPredicted RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 PIN1P1O15428 100 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 NKX2-8O15522 239 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 KLK10O43240 276 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ARHGEF9O43307 516 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 EEF1E1O43324 174 aaKnown RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 HCRTR2O43614 444 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 SULT1B1O43704 296 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 LANCL1O43813 399 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 FADS1O60427 444 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ICOSLGO75144 302 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 NPIPB7O75200 414 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ZNF254O75437 659 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 UPK3AO75631 287 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ZNF432O94892 652 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 DHFRP00374 187 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 PAHP00439 452 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 IFNA2P01563 188 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 C1QBP02746 253 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 RAF1P04049 648 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 QDPRP09417 244 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 CALCBP10092 127 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 TFPIP10646 304 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 GP1BBP13224 206 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 IGFBP2P18065 325 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 PGCP20142 388 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 S100A1P23297 94 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 MAPK3P27361 379 aaPredicted RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 IL12BP29460 328 aa4.24□□□□□ -1.73
USP48-202ENST00000374730 ERP29P30040 261 aaKnown RBP4.24□□□□□ -1.73
USP48-202ENST00000374730 OR1D4P47884 311 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms