RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 MESTQ5EB52 335 aa12.71□□□□□ -0.38
HMGA1-203ENST00000374116 LYPD4Q6UWN0 246 aa12.71□□□□□ -0.38
HMGA1-203ENST00000374116 MAMDC2Q7Z304 686 aaPredicted RBP12.71□□□□□ -0.38
HMGA1-203ENST00000374116 FAM220AQ7Z4H9 259 aa12.71□□□□□ -0.38
HMGA1-203ENST00000374116 CDC20BQ86Y33 519 aa12.71□□□□□ -0.38
HMGA1-203ENST00000374116 MISPQ8IVT2 679 aa12.71□□□□□ -0.38
HMGA1-203ENST00000374116 SPICQ8N5J4 248 aa12.71□□□□□ -0.38
HMGA1-203ENST00000374116 OR2M7Q8NG81 312 aa12.71□□□□□ -0.38
HMGA1-203ENST00000374116 CXorf58Q96LI9 332 aa12.71□□□□□ -0.38
HMGA1-203ENST00000374116 GNRHR2Q96P88 292 aa12.71□□□□□ -0.38
HMGA1-203ENST00000374116 PDCD1LG2Q9BQ51 273 aa12.71□□□□□ -0.38
HMGA1-203ENST00000374116 SRA1Q9HD15 236 aaKnown RBP12.71□□□□□ -0.38
HMGA1-203ENST00000374116 RELNP78509 3460 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 A0A1W2PPK0 400 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 TTLL8A6PVC2 850 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 ZNF593O00488 134 aaPredicted RBP12.7□□□□□ -0.38
HMGA1-203ENST00000374116 GIPP09681 153 aaPredicted RBP12.7□□□□□ -0.38
HMGA1-203ENST00000374116 ATF1P18846 271 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 SRMP19623 302 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 CNR1P21554 472 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 BLVRAP53004 296 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 DLX5P56178 289 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 TSPAN5P62079 268 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 PITPNAQ00169 270 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 FGL1Q08830 312 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 DYRK1AQ13627 763 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 EEF1A1P5Q5VTE0 462 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 BAIAP2L2Q6UXY1 529 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 TMEM178AQ8NBL3 297 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 DUSP19Q8WTR2 217 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 TSSK2Q96PF2 358 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 C12orf57Q99622 126 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 PTDSS2Q9BVG9 487 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 CACNG6Q9BXT2 260 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 TAS2R5Q9NYW4 299 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 ZNF346Q9UL40 294 aaKnown RBP12.7□□□□□ -0.38
HMGA1-203ENST00000374116 KLF13Q9Y2Y9 288 aaPredicted RBP12.7□□□□□ -0.38
HMGA1-203ENST00000374116 MED12Q93074 2177 aa12.7□□□□□ -0.38
HMGA1-203ENST00000374116 TMED7-TICAM2A0A0A6YYA0 188 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 TMEM72A0PK05 275 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 SULT1B1O43704 296 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 LPLP06858 475 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 GRPRP30550 384 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 FOXO1Q12778 655 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 C1QL3Q5VWW1 255 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 C5orf46Q6UWT4 87 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 OR6V1Q8N148 313 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 STPG2Q8N412 459 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 RNF166Q96A37 237 aaPredicted RBP12.69□□□□□ -0.38
HMGA1-203ENST00000374116 SNRNP40Q96DI7 357 aaKnown RBP12.69□□□□□ -0.38
HMGA1-203ENST00000374116 ANGPTL4Q9BY76 406 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 DNTTIP1Q9H147 329 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 SAV1Q9H4B6 383 aaPredicted RBP12.69□□□□□ -0.38
HMGA1-203ENST00000374116 NOX4Q9NPH5 578 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 NPDC1Q9NQX5 325 aaPredicted RBP12.69□□□□□ -0.38
HMGA1-203ENST00000374116 SPATA2Q9UM82 520 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 TMED7Q9Y3B3 224 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 TMEM14AQ9Y6G1 99 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 CFAP46Q8IYW2 2715 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 HSPB2A8KAH6 182 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 A8MVM7 634 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 PRR32B1ATL7 298 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 KLRC4-KLRK1H3BQV0 150 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 DCTN6O00399 190 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 PHYHO14832 338 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 EEF1E1O43324 174 aaKnown RBP12.69□□□□□ -0.38
HMGA1-203ENST00000374116 GSTZ1O43708 216 aaPredicted RBP12.69□□□□□ -0.38
HMGA1-203ENST00000374116 SUSD5O60279 629 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 C1QL1O75973 258 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 UBL3O95164 117 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 HRGP04196 525 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 CELA3AP09093 270 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 CXCL2P19875 107 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 MMP15P51511 669 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 NANOS3P60323 173 aaKnown RBP12.69□□□□□ -0.38
HMGA1-203ENST00000374116 PLGLB1Q02325 96 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 HSPB2Q16082 182 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 SGCBQ16585 318 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 FAM69AQ5T7M9 428 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 POMZP3Q6PJE2 187 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 GRINAQ7Z429 371 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 DND1Q8IYX4 353 aaKnown RBP12.69□□□□□ -0.38
HMGA1-203ENST00000374116 WDSUB1Q8N9V3 476 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 FAM173AQ9BQD7 235 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 C1QTNF6Q9BXI9 259 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 TTTY12Q9BZ98 90 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 WDR76Q9H967 626 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 ASF1BQ9NVP2 202 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 MED11Q9P086 117 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 MRM2Q9UI43 246 aaKnown RBP12.69□□□□□ -0.38
HMGA1-203ENST00000374116 LAMP5Q9UJQ1 280 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 FBXL2Q9UKC9 423 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 AK6Q9Y3D8 172 aaKnown RBP12.69□□□□□ -0.38
HMGA1-203ENST00000374116 WIF1Q9Y5W5 379 aa12.69□□□□□ -0.38
HMGA1-203ENST00000374116 A0A1B0GUH1 482 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 LRRC3CA6NJW4 275 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 L7N2F9 121 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 XKRYO14609 159 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 SSNA1O43805 119 aa12.68□□□□□ -0.38
HMGA1-203ENST00000374116 PEX14O75381 377 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms