RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CEBPEQ15744 281 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 GJC3Q8NFK1 279 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 BAHD1Q8TBE0 780 aaPredicted RBP12.94□□□□□ -0.34
LMX1B-202ENST00000373474 DOCK1Q14185 1865 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 ZNF749O43361 778 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 CT45A10P0DMU9 189 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 CD37P11049 281 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 EPHA2P29317 976 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 HAGHQ16775 308 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 CLLU1Q5K131 121 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 SLC37A2Q8TED4 501 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 TMED6Q8WW62 240 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 PIGTQ969N2 578 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 CYB5R1Q9UHQ9 305 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 CCSO14618 274 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 EMP3P54852 163 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 B4GALNT1Q00973 533 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 TPBGQ13641 420 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 LYRM7Q5U5X0 104 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 C12orf73Q69YU5 71 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 XAF1Q6GPH4 301 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 RNF165Q6ZSG1 346 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 BAP18Q8IXM2 172 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 GABRG1Q8N1C3 465 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 SAT2Q96F10 170 aaPredicted RBP12.94□□□□□ -0.34
LMX1B-202ENST00000373474 WWTR1Q9GZV5 400 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 ISG20L2Q9H9L3 353 aaKnown RBP12.94□□□□□ -0.34
LMX1B-202ENST00000373474 GOLT1BQ9Y3E0 138 aa12.94□□□□□ -0.34
LMX1B-202ENST00000373474 A0A0A6YYD5 115 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 LOC107986453A0A1B0GWG9 222 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 UPK1AO00322 258 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 HSPB6O14558 160 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 ALOX12BO75342 701 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 CSNK1EP49674 416 aaKnown RBP12.93□□□□□ -0.34
LMX1B-202ENST00000373474 ELLP55199 621 aaPredicted RBP12.93□□□□□ -0.34
LMX1B-202ENST00000373474 FABP9Q0Z7S8 132 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 YOD1Q5VVQ6 348 aaPredicted RBP12.93□□□□□ -0.34
LMX1B-202ENST00000373474 AGBL5Q8NDL9 886 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 OR13C5Q8NGS8 318 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 OR4F5Q8NH21 305 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 ZNF775Q96BV0 537 aaPredicted RBP12.93□□□□□ -0.34
LMX1B-202ENST00000373474 OR4F4Q96R69 305 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 MRPL22Q9NWU5 206 aaKnown RBP12.93□□□□□ -0.34
LMX1B-202ENST00000373474 XKRY2A2RUG3 117 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 E5RGE8 158 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 FCMRO60667 390 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 FCGR2CP31995 323 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 RAC1P63000 192 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 CCDC190Q86UF4 302 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 OR1J1Q8NGS3 322 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 CHAC2Q8WUX2 184 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 ZNF845Q96IR2 970 aaPredicted RBP12.93□□□□□ -0.34
LMX1B-202ENST00000373474 CTDSP1Q9GZU7 261 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 PLAC1Q9HBJ0 212 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 CHST11Q9NPF2 352 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 FGF21Q9NSA1 209 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 NSG2Q9Y328 171 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 CDK5RAP2Q96SN8 1893 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 AKR7A3O95154 331 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 CTXN2P0C2S0 81 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 RAB7AP51149 207 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 KRTDAPP60985 99 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 ZNF85Q03923 595 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 CDK5R1Q15078 307 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 DCAF12Q5T6F0 453 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 NCR3LG1Q68D85 454 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 CRLF2Q9HC73 371 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 GNG12Q9UBI6 72 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 OR1D5P58170 312 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 ACOT6Q3I5F7 207 aaPredicted RBP12.93□□□□□ -0.34
LMX1B-202ENST00000373474 ANKRD33Q7Z3H0 272 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 SUMF1Q8NBK3 374 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 FER1L6Q2WGJ9 1857 aa12.93□□□□□ -0.34
LMX1B-202ENST00000373474 HRO43593 1189 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 PRAMEF4O60810 478 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 CD46P15529 392 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 GABRA4P48169 554 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 RUNX2Q13950 521 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 LRRTM1Q86UE6 522 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 ZNF814B7Z6K7 855 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 M0R082 166 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 BCL2L11O43521 198 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 ACSM4P0C7M7 580 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 NQO2P16083 231 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 EMDP50402 254 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 FAM219BQ5XKK7 198 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 TIPARPQ7Z3E1 657 aaKnown RBP12.92□□□□□ -0.34
LMX1B-202ENST00000373474 GLCCI1Q86VQ1 547 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 OR11L1Q8NGX0 322 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 UCN3Q969E3 161 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 PCED1AQ9H1Q7 454 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 BCO1Q9HAY6 547 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 SLC6A13Q9NSD5 602 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 CCKARP32238 428 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 CSN1S1P47710 185 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 SUB1P53999 127 aaKnown RBP eCLIP12.92□□□□□ -0.34
LMX1B-202ENST00000373474 RAE1P78406 368 aaKnown RBP12.92□□□□□ -0.34
LMX1B-202ENST00000373474 ZBTB37Q5TC79 503 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 NECAP1Q8NC96 275 aa12.92□□□□□ -0.34
LMX1B-202ENST00000373474 GINS3Q9BRX5 216 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms