RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 MPGP29372 298 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 ETV6P41212 452 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 ZNF45Q02386 682 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 CEP78Q5JTW2 689 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 C9orf135Q5VTT2 229 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 GCNT2Q8N0V5 402 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 OR13C3Q8NGS6 347 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 OR1F12Q8NHA8 337 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 ORAI1Q96D31 301 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 WDFY2Q96P53 400 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 AK6Q9Y3D8 172 aaKnown RBP23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 MED12LQ86YW9 2145 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 FREM1Q5H8C1 2179 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 C1QTNF9BB2RNN3 333 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 WDR1O75083 606 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 ANXA2P07355 339 aaKnown RBP23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 C1QTNF9P0C862 333 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 TNFSF8P32971 234 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 PSG4Q00888 419 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 ZNF774Q6NX45 483 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 STAC2Q6ZMT1 411 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 C9orf106Q8NAJ2 232 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 SLC25A18Q9H1K4 315 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 COMMD3Q9UBI1 195 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 DAPK2Q9UIK4 370 aa23.03■■□□□ 1.28
ATPAF1-202ENST00000371937 M0R135 149 aa23.02■■□□□ 1.28
ATPAF1-202ENST00000371937 TMEM127O75204 238 aa23.02■■□□□ 1.28
ATPAF1-202ENST00000371937 SLC6A9P48067 706 aa23.02■■□□□ 1.28
ATPAF1-202ENST00000371937 PSMD7P51665 324 aa23.02■■□□□ 1.28
ATPAF1-202ENST00000371937 FAM57BQ71RH2 274 aa23.02■■□□□ 1.28
ATPAF1-202ENST00000371937 CCDC190Q86UF4 302 aa23.02■■□□□ 1.28
ATPAF1-202ENST00000371937 Q8NA96 180 aa23.02■■□□□ 1.28
ATPAF1-202ENST00000371937 ZNF799Q96GE5 643 aa23.02■■□□□ 1.28
ATPAF1-202ENST00000371937 ABCB9Q9NP78 766 aa23.02■■□□□ 1.28
ATPAF1-202ENST00000371937 CKLFQ9UBR5 152 aa23.02■■□□□ 1.28
ATPAF1-202ENST00000371937 OR6C6A6NF89 314 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 FIGNL2A6NMB9 653 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 SYT7O43581 403 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 MMP7P09237 267 aaPredicted RBP23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 PATE4P0C8F1 98 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 SLC2A1P11166 492 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 EPXP11678 715 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 TPTEP56180 551 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 PPP3R1P63098 170 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 RSPO1Q2MKA7 263 aaPredicted RBP23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 LINC00303Q3SY05 128 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 PRSS45Q7RTY3 260 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 LAX1Q8IWV1 398 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 OR8B12Q8NGG6 310 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 SLC30A2Q9BRI3 323 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 PALMDQ9NP74 551 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 N6AMT1Q9Y5N5 214 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 A0A1B0GVI7 797 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 J3QRK9 145 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 CNOT4O95628 575 aaKnown RBP23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 TPOP07202 933 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 CRYGSP22914 178 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 FOXG1P55316 489 aaPredicted RBP23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 DRAM2Q6UX65 266 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 UNQ6494/PRO21346Q6UXR6 183 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 TFAP2EQ6VUC0 442 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 ZNF433Q8N7K0 673 aaPredicted RBP23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 OR6K3Q8NGY3 331 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 PGAM5Q96HS1 289 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 WNT5BQ9H1J7 359 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 RNF121Q9H920 327 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 SLC17A5Q9NRA2 495 aa23.01■■□□□ 1.27
ATPAF1-202ENST00000371937 BOD1L1Q8NFC6 3051 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 A0A096LPE4 126 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 A0A1W2PPZ6 126 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 ANKRD61A6NGH8 418 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 CD40LGP29965 261 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 HTR5AP47898 357 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 SLC25A35Q3KQZ1 300 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 ANKRD16Q6P6B7 361 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 C16orf87Q6PH81 154 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 DPPA2Q7Z7J5 298 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 CISD2Q8N5K1 135 aaKnown RBP23■■□□□ 1.27
ATPAF1-202ENST00000371937 CNEP1R1Q8N9A8 125 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 AKR7LQ8NHP1 331 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 FGFBP3Q8TAT2 258 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 OR51E1Q8TCB6 317 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 ATPIF1Q9UII2 106 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 FOXJ3Q9UPW0 622 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 V9GY05 133 aa23■■□□□ 1.27
ATPAF1-202ENST00000371937 ARHGAP21Q5T5U3 1957 aa22.99■■□□□ 1.27
ATPAF1-202ENST00000371937 MBD3L4A6NDZ8 208 aaPredicted RBP22.99■■□□□ 1.27
ATPAF1-202ENST00000371937 MBD3L3A6NE82 208 aaPredicted RBP22.99■■□□□ 1.27
ATPAF1-202ENST00000371937 MBD3L5A6NJ08 208 aaPredicted RBP22.99■■□□□ 1.27
ATPAF1-202ENST00000371937 APEX1P27695 318 aaKnown RBP22.99■■□□□ 1.27
ATPAF1-202ENST00000371937 PPP5CP53041 499 aa22.99■■□□□ 1.27
ATPAF1-202ENST00000371937 LRRTM1Q86UE6 522 aa22.99■■□□□ 1.27
ATPAF1-202ENST00000371937 MBD3L2Q8NHZ7 208 aaPredicted RBP22.99■■□□□ 1.27
ATPAF1-202ENST00000371937 SLC7A6Q92536 515 aa22.99■■□□□ 1.27
ATPAF1-202ENST00000371937 ZNF275Q9NSD4 429 aaPredicted RBP22.99■■□□□ 1.27
ATPAF1-202ENST00000371937 TRAV8-7A0A075B6U6 113 aa22.98■■□□□ 1.27
ATPAF1-202ENST00000371937 HOXD4P09016 255 aaPredicted RBP22.98■■□□□ 1.27
ATPAF1-202ENST00000371937 ABOP16442 354 aa22.98■■□□□ 1.27
ATPAF1-202ENST00000371937 FSTP19883 344 aa22.98■■□□□ 1.27
ATPAF1-202ENST00000371937 THBS2P35442 1172 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms