RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 FCGR2AP12318 317 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 IGFBP5P24593 272 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 APEX1P27695 318 aaKnown RBP6.22□□□□□ -1.41
USP1-202ENST00000371146 ASAH1Q13510 395 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 GRK1Q15835 563 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 RFX4Q33E94 735 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 RNF212Q495C1 297 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 ACSF3Q4G176 576 aaPredicted RBP6.22□□□□□ -1.41
USP1-202ENST00000371146 POC5Q8NA72 575 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 ZNF671Q8TAW3 534 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 HSD17B8Q92506 261 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 NEUROG1Q92886 237 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 DVL3Q92997 716 aaPredicted RBP6.22□□□□□ -1.41
USP1-202ENST00000371146 RBPMSQ93062 196 aaKnown RBP6.22□□□□□ -1.41
USP1-202ENST00000371146 OR52D1Q9H346 318 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 NGBQ9NPG2 151 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 COPZ2Q9P299 210 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 WARS2Q9UGM6 360 aaKnown RBP6.22□□□□□ -1.41
USP1-202ENST00000371146 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 SMIM30A4D0T7 59 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 MED6O75586 246 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 EIF3GO75821 320 aaKnown RBP eCLIP6.22□□□□□ -1.41
USP1-202ENST00000371146 C1QL1O75973 258 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 SBK2P0C263 348 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 GZMKP49863 264 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 SKP2Q13309 424 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 COMMD7Q86VX2 200 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 ZNF786Q8N393 782 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 ARHGEF39Q8N4T4 335 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 ABHD4Q8TB40 342 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 SNX33Q8WV41 574 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 HGDQ93099 445 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 UBE2FQ969M7 185 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 WDYHV1Q96HA8 205 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 SLC38A2Q96QD8 506 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 NUAK2Q9H093 628 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 OPA3Q9H6K4 179 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 SEBOXQ9HB31 216 aaPredicted RBP6.22□□□□□ -1.41
USP1-202ENST00000371146 A0A087WUJ7 227 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 CCDC182A6NF36 153 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 EFNA2O43921 213 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 IGHG1P01857 330 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 CTSSP25774 331 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 APLNRP35414 380 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 SOX2P48431 317 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 RAC3P60763 192 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 IGLV3-21P80748 117 aaPredicted RBP6.22□□□□□ -1.41
USP1-202ENST00000371146 GGTLC2Q14390 218 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 HABP2Q14520 560 aaPredicted RBP6.22□□□□□ -1.41
USP1-202ENST00000371146 ODF1Q14990 250 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 TSTQ16762 297 aaKnown RBP6.22□□□□□ -1.41
USP1-202ENST00000371146 PCSK4Q6UW60 755 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 ZBTB46Q86UZ6 589 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 CPOQ8IVL8 374 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 PDZD9Q8IXQ8 264 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 OR6Q1Q8NGQ2 317 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 OR5J2Q8NH18 312 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 ASB5Q8WWX0 329 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 ZBTB8AQ96BR9 441 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 ZNF524Q96C55 264 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 OBP2BQ9NPH6 170 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 ACER3Q9NUN7 267 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 MYEF2Q9P2K5 600 aaKnown RBP6.22□□□□□ -1.41
USP1-202ENST00000371146 DKK4Q9UBT3 224 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 NUBP2Q9Y5Y2 271 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 MED12LQ86YW9 2145 aa6.22□□□□□ -1.41
USP1-202ENST00000371146 HSPB2A8KAH6 182 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 PRR23D1E9PI22 279 aaPredicted RBP6.21□□□□□ -1.41
USP1-202ENST00000371146 LYNX1G3V0Z9 82 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 ACTL6AO96019 429 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 GASTP01350 101 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 PRR23D2P0DMB1 279 aaPredicted RBP6.21□□□□□ -1.41
USP1-202ENST00000371146 LYNX1P0DP58 116 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 RAP2AP10114 183 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 BMP4P12644 408 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 PRPH2P23942 346 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 GCH1P30793 250 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 PTGER4P35408 488 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 THBS2P35442 1172 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 SERPINB10P48595 397 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 ATP4BP51164 291 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 HTD2P86397 168 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 ZNF45Q02386 682 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 HSPB2Q16082 182 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 MICAQ29983 383 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 OR2B11Q5JQS5 317 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 STEAP3Q658P3 488 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 OR2A2Q6IF42 318 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 DPY19L4Q7Z388 723 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 GTPBP8Q8N3Z3 284 aaPredicted RBP6.21□□□□□ -1.41
USP1-202ENST00000371146 NANOGP1Q8N7R0 232 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 ST8SIA1Q92185 356 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 PFDN5Q99471 154 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 CHST11Q9NPF2 352 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 CRIM1Q9NZV1 1036 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 LRBAP50851 2863 aa6.21□□□□□ -1.41
USP1-202ENST00000371146 IQCMA0A1B0GVH7 501 aa6.21□□□□□ -1.42
USP1-202ENST00000371146 MEIOCA2RUB1 952 aa6.21□□□□□ -1.42
USP1-202ENST00000371146 C19orf84I3L1E1 186 aa6.21□□□□□ -1.42
USP1-202ENST00000371146 PHYHO14832 338 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms