RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 OR14L1PQ8NHC6 308 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TMEM171Q8WVE6 324 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 ZNF501Q96CX3 271 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 ORAI1Q96D31 301 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 RNF183Q96D59 192 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 ZNF503Q96F45 646 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 ZNF347Q96SE7 839 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 TIMP4Q99727 224 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 ZNF2Q9BSG1 426 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 DOHHQ9BU89 302 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 ULBP2Q9BZM5 246 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 LAT2Q9GZY6 243 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 SPRTNQ9H040 489 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 SAP30LQ9HAJ7 183 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 CDH20Q9HBT6 801 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 ACER3Q9NUN7 267 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 ACOXLQ9NUZ1 547 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 C1RLQ9NZP8 487 aa3.42□□□□□ -1.86
MCF2-203ENST00000370576 GMPR2Q9P2T1 348 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 MARCOQ9UEW3 520 aaPredicted RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 TESQ9UGI8 421 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 WARS2Q9UGM6 360 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 SAMD4AQ9UPU9 718 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 MRPS17Q9Y2R5 130 aaKnown RBP3.42□□□□□ -1.86
MCF2-203ENST00000370576 CXCR6O00574 342 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 SC5DO75845 299 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TOXO94900 526 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TFAP2AP05549 437 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 SCGB1A1P11684 91 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 IL9P15248 144 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 ZNF23P17027 643 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 HLA-GP17693 338 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 ANOS1P23352 680 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 DCTP40126 519 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 RFX4Q33E94 735 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 KRTAP27-1Q3LI81 207 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 C14orf28Q4W4Y0 310 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 SLC35D3Q5M8T2 416 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 PATL1Q86TB9 770 aaKnown RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 LACC1Q8IV20 430 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 SLC25A45Q8N413 288 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 NANOGP1Q8N7R0 232 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 ACBD4Q8NC06 268 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 OR51D1Q8NGF3 324 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 ZNF420Q8TAQ5 688 aaPredicted RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 FOPNLQ96NB1 174 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 HIST1H2AAQ96QV6 131 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 ATF6BQ99941 703 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 UTP23Q9BRU9 249 aaKnown RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 KLHL31Q9H511 634 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 FBXO8Q9NRD0 319 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 PAK1IP1Q9NWT1 392 aaPredicted RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 BSNQ9UPA5 3926 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 PPIAL4CA0A0B4J2A2 164 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 ATP6AP2A0A1C7CYW4 349 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 DHRS12A0PJE2 317 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 OR6C68A6NDL8 312 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TBC1D3BA6NDS4 549 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 ANKUB1A6NFN9 424 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TLCD2A6NGC4 264 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 PRSS46E5RG02 174 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 M0QZ24 198 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 PRKYO43930 277 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 NPIPB7O75200 414 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 STK17BO94768 372 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 CBX7O95931 251 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 HIST1H2AGP0C0S8 130 aaPredicted RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 SLC2A1P11166 492 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 PPP2R1BP30154 601 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TALDO1P37837 337 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 RBM34P42696 430 aaKnown RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 HLCSP50747 726 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 CRYBA4P53673 196 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 IFITM2Q01629 132 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TFF2Q03403 129 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 IKZF1Q13422 519 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 GPR18Q14330 331 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 P2RY14Q15391 338 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 RABL3Q5HYI8 236 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 SLC22A10Q63ZE4 541 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TMEM225Q6GV28 225 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TYW3Q6IPR3 259 aaKnown RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 CD200R1LQ6Q8B3 271 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 FRRS1Q6ZNA5 592 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 Q6ZSR6 202 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 FOXL2NBQ6ZUU3 175 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 RBM23Q86U06 439 aaKnown RBP3.41□□□□□ -1.86
MCF2-203ENST00000370576 ADPRHL1Q8NDY3 354 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 OR4D9Q8NGE8 314 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 OR56A1Q8NGH5 318 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 OR4D11Q8NGI4 311 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 UBASH3BQ8TF42 649 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 CREB3L1Q96BA8 519 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 TMEM80Q96HE8 168 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 ZNF354BQ96LW1 612 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 JMJD8Q96S16 334 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 THTPAQ9BU02 230 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 CDCA4Q9BXL8 241 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 UGT2B28Q9BY64 529 aa3.41□□□□□ -1.86
MCF2-203ENST00000370576 MRPS26Q9BYN8 205 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms