RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 LRP12Q9Y561 859 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 HRH3Q9Y5N1 445 aa4.78□□□□□ -1.64
SMNDC1-202ENST00000369603 HEATR5BQ9P2D3 2071 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 MEIS3P1A6NDR6 274 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 FAM166BA8MTA8 275 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 TRAPPC2LH3BP13 241 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 GOSR2O14653 212 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 AQP8O94778 261 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 F10P00742 488 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 MSL3P1P0C860 447 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 GCH1P30793 250 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF133P52736 654 aaPredicted RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 IL13RA1P78552 427 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 PMPCAQ10713 525 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 SHBQ15464 509 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ELP2Q6IA86 826 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 GLIPR1L1Q6UWM5 242 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 RDH10Q8IZV5 341 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ZADH2Q8N4Q0 377 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 OR4K15Q8NH41 348 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 OR6X1Q8NH79 312 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 OR51E1Q8TCB6 317 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 RBPMSQ93062 196 aaKnown RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF285Q96NJ3 590 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 DERL3Q96Q80 235 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ARPC5LQ9BPX5 153 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 WFDC6Q9BQY6 131 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 PAPOLGQ9BWT3 736 aaKnown RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ZFP64Q9NPA5 681 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 KCNIP1Q9NZI2 227 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 GHRLQ9UBU3 117 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 KCNE5Q9UJ90 142 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 TCFL5Q9UL49 500 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 SLC5A6Q9Y289 635 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 RHBDD3Q9Y3P4 386 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ARID1AO14497 2285 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 COL4A6Q14031 1691 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 PTPRZ1P23471 2315 aaPredicted RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 LIPT2A6NK58 231 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 DNPH1O43598 174 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 TPPPO94811 219 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 SPDEFO95238 335 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 NTN1O95631 604 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 TXNDC12O95881 172 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 CCL4P13236 92 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 GABRR1P24046 479 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 CLDN15P56746 228 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 TNK1Q13470 666 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 OPCMLQ14982 345 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 SLC25A35Q3KQZ1 300 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 LRRC37A5PQ49AS3 106 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 MESTQ5EB52 335 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ALKAL2Q6UX46 152 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 LYPD8Q6UX82 237 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 C16orf47Q6ZP98 133 aaPredicted RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 CNEP1R1Q8N9A8 125 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 OR52I2Q8NH67 350 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 PPP1R35Q8TAP8 253 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ADIPOR1Q96A54 375 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 GSX2Q9BZM3 304 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ADAM19Q9H013 955 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 TREM1Q9NP99 234 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 GPR84Q9NQS5 396 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 FSCN3Q9NQT6 498 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 PLEKHB1Q9UF11 243 aaPredicted RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 CGGBP1Q9UFW8 167 aaPredicted RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 SLC23A1Q9UHI7 598 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ING1Q9UK53 422 aaPredicted RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 PIGLQ9Y2B2 252 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 BORCS7-ASMTA0A0B4J1R7 106 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 OR6C6A6NF89 314 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 PRR19A6NJB7 356 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ARGFXA6NJG6 315 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 TNFSF11O14788 317 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 XRCC3O43542 346 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 IGKV3-11P04433 115 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 SFTPBP07988 381 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ASAH2BP0C7U1 165 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 SLC2A1P11166 492 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 CTLA4P16410 223 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 BLVRBP30043 206 aaPredicted RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ARR3P36575 388 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ECI1P42126 302 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 CCL11P51671 97 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 CLDN20P56880 219 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 PPIAP62937 165 aaKnown RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 DGCR2P98153 550 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 GNMTQ14749 295 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 WDR38Q5JTN6 314 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ELFN2Q5R3F8 820 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 SYT9Q86SS6 491 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 CDC20BQ86Y33 519 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 NAXDQ8IW45 347 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 SLC38A6Q8IZM9 456 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ABCA7Q8IZY2 2146 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 GTPBP8Q8N3Z3 284 aaPredicted RBP4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ASB10Q8WXI3 467 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 ARL5BQ96KC2 179 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 GNRHR2Q96P88 292 aa4.77□□□□□ -1.65
SMNDC1-202ENST00000369603 KCNJ15Q99712 375 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms