RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CLUP10909 449 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 PSMB1P20618 241 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 AGTR1P30556 359 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 PRR5P85299 388 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 RAB35Q15286 201 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 PRICKLE4Q2TBC4 344 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 RNFT1Q5M7Z0 435 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 SEM1Q6ZVN7 128 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 OR52I1Q8NGK6 324 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 OR1S2Q8NGQ3 325 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 MRGPRDQ8TDS7 321 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 GCDHQ92947 438 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 GAL3ST3Q96A11 431 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 BSCL2Q96G97 398 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 G6PC3Q9BUM1 346 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 ACTR3CQ9C0K3 210 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 AMBNQ9NP70 447 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 MAN2C1Q9NTJ4 1040 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 ZCCHC3Q9NUD5 404 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 SLC9A8Q9Y2E8 581 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 FBXO7Q9Y3I1 522 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 TRAV14DV4A0A0A6YYC5 116 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 MASP2O00187 686 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 MFNGO00587 321 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 TP53I11O14683 189 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 SURF4O15260 269 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 GATBO75879 557 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 GLCEO94923 617 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 EIF4EP06730 217 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 NR2C1P13056 603 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 PPIBP23284 216 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 SHC1P29353 583 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 NTSP30990 170 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 THBS4P35443 961 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 CD200P41217 278 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 GLP1RP43220 463 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 IDH2P48735 452 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 TNFSF10P50591 281 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 CRISP1P54107 249 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 B3GALT5-AS1P59052 145 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 BTN3A2P78410 334 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 BLOC1S1P78537 153 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 SPIBQ01892 262 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 MXD1Q05195 221 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 POU4F2Q12837 409 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 CDSNQ15517 529 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 MST1LQ2TV78 715 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 NDUFAF6Q330K2 333 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 DEF8Q6ZN54 512 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 NDUFAF7Q7L592 441 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 TOMM5Q8N4H5 51 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 MAFIPQ8WZ33 124 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 ARL11Q969Q4 196 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 OR5B2Q96R09 309 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF649Q9BS31 505 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 PCGF1Q9BSM1 259 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 ADAT1Q9BUB4 502 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 CACFD1Q9UGQ2 172 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 NXT1Q9UKK6 140 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 CAMK2AQ9UQM7 478 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 NPFFR2Q9Y5X5 522 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 DNAH7Q8WXX0 4024 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 URB1O60287 2271 aaKnown RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 BCHEP06276 602 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 GSTP1P09211 210 aaKnown RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CD46P15529 392 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 NQO2P16083 231 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 SRP9P49458 86 aaKnown RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 NCBP2P52298 156 aaKnown RBP eCLIP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 SLC37A1P57057 533 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 MLF1P58340 268 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 GMFBP60983 142 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 ID2Q02363 134 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 MFAP5Q13361 173 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 SCARB2Q14108 478 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF385BQ569K4 471 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF468Q5VIY5 522 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 SLC25A24Q6NUK1 477 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CD300LDQ6UXZ3 194 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 RANBP3LQ86VV4 465 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 TMEM200AQ86VY9 491 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 NR2C2APQ86WQ0 139 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 C9orf40Q8IXQ3 194 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF614Q8N883 585 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 ADPRHL1Q8NDY3 354 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 OR8J2Q8NGG1 315 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 OR13C8Q8NGS7 320 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CA5BP1Q8WTZ4 195 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 SAMD8Q96LT4 415 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 NIPSNAP1Q9BPW8 284 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 C1orf198Q9H425 327 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 GPN1Q9HCN4 374 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 RARRES3Q9UL19 164 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CHCHD2Q9Y6H1 151 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CHD3Q12873 2000 aaKnown RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CACNA1GO43497 2377 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 LRRC3CA6NJW4 275 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 NME6O75414 186 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CELA2AP08217 269 aa6.12□□□□□ -1.43
CSDE1-204ENST00000369530 CCR4P51679 360 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms