RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SLC25A15Q9Y619 301 aa9.52□□□□□ -0.88
BRCC3-204ENST00000369462 COL12A1Q99715 3063 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 LOC100509620A0A075B734 347 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 TRBV2A0A0J9YWF9 115 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 M0R135 149 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 SERPINA5P05154 406 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 CELA3BP08861 270 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 CRYGSP22914 178 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 DCTDP32321 178 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 CX3CR1P49238 355 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 RGS6P49758 472 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 TAS2R43P59537 309 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 BDH1Q02338 343 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 CCDC58Q4VC31 144 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 ARL9Q6T311 187 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 GPR141Q7Z602 305 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 P2RY8Q86VZ1 359 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 OR13F1Q8NGS4 319 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 OR2G2Q8NGZ5 317 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 UFD1Q92890 307 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 PPP1R14AQ96A00 147 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 ZNF799Q96GE5 643 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 COQ7Q99807 217 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 ISYNA1Q9NPH2 558 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 FRRS1LQ9P0K9 344 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 AMDHD2Q9Y303 409 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 R4GMQ9 66 aa9.52□□□□□ -0.89
BRCC3-204ENST00000369462 C5orf49A4QMS7 147 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 LOC110117498-PIK3R3F6TDL0 507 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 CBR1P16152 277 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 GRNP28799 593 aaKnown RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 OTX1P32242 354 aaPredicted RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 MMP16P51512 607 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 ZNF121P58317 390 aaPredicted RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 SLC3A1Q07837 685 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 TPBGQ13641 420 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 CDK5R1Q15078 307 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 ODF4Q2M2E3 257 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 ZNF829Q3KNS6 432 aaPredicted RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 FBXL19-AS1Q494R0 122 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 RPL22L1Q6P5R6 122 aaKnown RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 XKRXQ6PP77 449 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 MYPOPQ86VE0 399 aaPredicted RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 PHC2Q8IXK0 858 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 ITLN2Q8WWU7 325 aaPredicted RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 DOK1Q99704 481 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 PDCD1LG2Q9BQ51 273 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 ST6GALNAC2Q9UJ37 374 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 SLC22A13Q9Y226 551 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 ANKHD1Q8IWZ3 2542 aaKnown RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 CADP27708 2225 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 CCRL2O00421 344 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 IGKV3-15P01624 115 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 ANXA2P07355 339 aaKnown RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 CPEP16870 476 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 ZNF14P17017 642 aaPredicted RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 APLNRP35414 380 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 TGM4P49221 684 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 TPTEP56180 551 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 PSMA6P60900 246 aaKnown RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 HGFACQ04756 655 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 MRPL28Q13084 256 aaKnown RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 ALKBH1Q13686 389 aaKnown RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 PPA1Q15181 289 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 SSX1Q16384 188 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 WDR38Q5JTN6 314 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 DMKNQ6E0U4 476 aaPredicted RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 PRSS35Q8N3Z0 413 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 SLC30A7Q8NEW0 376 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 HAVCR2Q8TDQ0 301 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 RNASE6Q93091 150 aaKnown RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 TMEM203Q969S6 136 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 ZC3HAV1LQ96H79 300 aaKnown RBP9.51□□□□□ -0.89
BRCC3-204ENST00000369462 FAM206AQ9NX38 181 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 ATPIF1Q9UII2 106 aa9.51□□□□□ -0.89
BRCC3-204ENST00000369462 OGG1O15527 345 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 PLPP2O43688 288 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 SRSF10O75494 262 aaKnown RBP9.5□□□□□ -0.89
BRCC3-204ENST00000369462 COX5BP10606 129 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 CD36P16671 472 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 GDI2P50395 445 aaKnown RBP9.5□□□□□ -0.89
BRCC3-204ENST00000369462 SNTB1Q13884 538 aaKnown RBP9.5□□□□□ -0.89
BRCC3-204ENST00000369462 GHSRQ92847 366 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 SMIM19Q96E16 107 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 LRRC46Q96FV0 321 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 POM121L2Q96KW2 1035 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 C4orf45Q96LM5 186 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 USB1Q9BQ65 265 aaKnown RBP9.5□□□□□ -0.89
BRCC3-204ENST00000369462 OR52A1Q9UKL2 312 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 DPPA5A6NC42 116 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 ZFPL1O95159 310 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 APOC1P02654 83 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 ACSM4P0C7M7 580 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 ANOS1P23352 680 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 ZNF544Q6NX49 715 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 FDX2Q6P4F2 183 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 DRAM2Q6UX65 266 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 FAM57BQ71RH2 274 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 CATSPERDQ86XM0 798 aa9.5□□□□□ -0.89
BRCC3-204ENST00000369462 RDH10Q8IZV5 341 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms