RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ST7LQ8TDW4 575 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 SORCS2Q96PQ0 1159 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 IL4I1Q96RQ9 567 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 ATF6BQ99941 703 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 OR2J1Q9GZK6 312 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 IMPAD1Q9NX62 359 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 PMF1-BGLAPU3KQ54 211 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 ITPR3Q14573 2671 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 VSTM5A8MXK1 200 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 ZNF250P15622 560 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 NAA10P41227 235 aaPredicted RBP12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 ALDH3B1P43353 468 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 BLVRAP53004 296 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 RPS7P62081 194 aaKnown RBP12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 PPP1CBP62140 327 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 CDK5R2Q13319 367 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 SMN1Q16637 294 aaKnown RBP12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 ALKBH6Q3KRA9 238 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 KRTAP27-1Q3LI81 207 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 C6orf141Q5SZD1 244 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 SPATC1Q76KD6 591 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 ENTHD1Q8IYW4 607 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 SYNPRQ8TBG9 265 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 MARS2Q96GW9 593 aaKnown RBP12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 AMELYQ99218 206 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 PRRG3Q9BZD7 231 aa12.93□□□□□ -0.34
SMPDL3A-201ENST00000368440 ZNF469Q96JG9 3925 aaPredicted RBP12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 CHD3Q12873 2000 aaKnown RBP12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 IGLV3-9A0A075B6K5 115 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 E9PQ18 207 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 XPNPEP2O43895 674 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 ANOS1P23352 680 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 PPOXP50336 477 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 EIF2B1Q14232 305 aaKnown RBP12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 SLC35D3Q5M8T2 416 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 AADACL4Q5VUY2 407 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 SHEQ5VZ18 495 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 LAIR2Q6ISS4 152 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 NAA40Q86UY6 237 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 IPCEF1Q8WWN9 437 aaPredicted RBP12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 SGCDQ92629 289 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 SLAMF6Q96DU3 332 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 VRK1Q99986 396 aaPredicted RBP12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 ELOVL3Q9HB03 270 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 TBCCD1Q9NVR7 557 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 STARD10Q9Y365 291 aa12.92□□□□□ -0.34
SMPDL3A-201ENST00000368440 PTGES3LE9PB15 166 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 F5H5K5 113 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 ADRA2AP08913 450 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 MRPL3P09001 348 aaKnown RBP12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 ACSM4P0C7M7 580 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 EVX1P49640 407 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 KLF3P57682 345 aaPredicted RBP12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 KLF14Q8TD94 323 aaPredicted RBP12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 GTF3AQ92664 365 aaKnown RBP12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 Q96MF0 132 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 TEAD3Q99594 435 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 TPK1Q9H3S4 243 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 DYNLRB1Q9NP97 96 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 DDX28Q9NUL7 540 aaKnown RBP12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 KLHDC2Q9Y2U9 406 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 A0A1W2PPW3 197 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 SSX4O60224 188 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 BMP4P12644 408 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 HCCSP53701 268 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 CDC42P60953 191 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 ARL9Q6T311 187 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 TGIF2LYQ8IUE0 185 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 DCLRE1CQ96SD1 692 aaKnown RBP12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 ABHD6Q9BV23 337 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 CENPMQ9NSP4 180 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 TAAR3PQ9P1P4 343 aa12.91□□□□□ -0.34
SMPDL3A-201ENST00000368440 DPPA5A6NC42 116 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 M0R233 179 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 SLC1A7O00341 560 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 FAM20BO75063 409 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 NAT2P11245 290 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 NUDT6P53370 316 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 ECH1Q13011 328 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 ZNF718Q3SXZ3 478 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 KCTD21Q4G0X4 260 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 NXNL2Q5VZ03 156 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 MBNL2Q5VZF2 373 aaKnown RBP12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 PRSS57Q6UWY2 283 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 APH1BQ8WW43 257 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 RHNO1Q9BSD3 238 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 MRPS26Q9BYN8 205 aaKnown RBP12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 AMBNQ9NP70 447 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 PTTG3PQ9NZH4 202 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 HIVEP1P15822 2718 aa12.9□□□□□ -0.34
SMPDL3A-201ENST00000368440 C5orf63A6NC05 138 aa12.89□□□□□ -0.35
SMPDL3A-201ENST00000368440 TRIM64A6NGJ6 449 aa12.89□□□□□ -0.35
SMPDL3A-201ENST00000368440 TRIM64BA6NI03 449 aa12.89□□□□□ -0.35
SMPDL3A-201ENST00000368440 ZNF878C9JN71 531 aa12.89□□□□□ -0.35
SMPDL3A-201ENST00000368440 M0R135 149 aa12.89□□□□□ -0.35
SMPDL3A-201ENST00000368440 WBP4O75554 376 aaKnown RBP12.89□□□□□ -0.35
SMPDL3A-201ENST00000368440 IGHV3-13P01766 116 aa12.89□□□□□ -0.35
SMPDL3A-201ENST00000368440 CRHBPP24387 322 aa12.89□□□□□ -0.35
SMPDL3A-201ENST00000368440 GCH1P30793 250 aa12.89□□□□□ -0.35
SMPDL3A-201ENST00000368440 OTX1P32242 354 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms