RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 AMD1P17707 334 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 IL12BP29460 328 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 HOXC5Q00444 222 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF85Q03923 595 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF542PQ5EBM4 170 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 GP6Q9HCN6 339 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 V9GYH0 126 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SCDO00767 359 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 RPS4Y1P22090 263 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 NMBRP28336 390 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 GDF10P55107 478 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CLDN15P56746 228 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 TSTQ16762 297 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SBSNQ6UWP8 590 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM229BQ8NBD8 167 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 NUBPLQ8TB37 319 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PLPPR1Q8TBJ4 325 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ST6GALNAC5Q9BVH7 336 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 GPR84Q9NQS5 396 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CUTCQ9NTM9 273 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 RCL1Q9Y2P8 373 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 BRS3P32247 399 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF84P51523 738 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 MEP1BQ16820 701 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 FAM129CQ86XR2 697 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 TVP23CQ96ET8 276 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 HSF4Q9ULV5 492 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 MBLAC1A4D2B0 266 aaPredicted RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PCBP3P57721 371 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 C1QTNF8P60827 252 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SELENOTP62341 195 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 EXD3Q8N9H8 876 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 LINC00615Q96LM1 132 aaPredicted RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ICAM5Q9UMF0 924 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF724A8MTY0 619 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 HSF1Q00613 529 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 MARCH9Q86YJ5 346 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 RTN4IP1Q8WWV3 396 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 NEUROG1Q92886 237 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ASF1AQ9Y294 204 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TLCD2A6NGC4 264 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 OR52A4PA6NMU1 304 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PSRC1Q6PGN9 363 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 C19orf48Q6RUI8 117 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SH2D5Q6ZV89 423 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 OR4S1Q8NGB4 309 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 MAGT1Q9H0U3 335 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ERVK13-1Q9NX77 482 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 MANSC4A6NHS7 340 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 IFITM5A6NNB3 132 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 FAM227AF5H4B4 570 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 GALTP07902 379 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ST8SIA2Q92186 375 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 C20orf24Q9BUV8 137 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ELP3Q9H9T3 547 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PEF1Q9UBV8 284 aaKnown RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TRAV6A0A075B6T7 132 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 A0A1W2PPV4 95 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SDCBPO00560 298 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 XCR1P46094 333 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SLC35A1P78382 337 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF273Q14593 569 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 BCDIN3DQ7Z5W3 292 aaKnown RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 COX18Q8N8Q8 333 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SIGLEC11Q96RL6 698 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF865P0CJ78 1059 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TIMM9Q9Y5J7 89 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 HLA-DOBP13765 273 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 FCARP24071 287 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PIP5KL1Q5T9C9 394 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 KLHDC8AQ8IYD2 350 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF75AQ96N20 296 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 WIPI2Q9Y4P8 454 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ZC3H12DA2A288 527 aaKnown RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TAPBPO15533 448 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 RECKO95980 971 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 MEPCEQ7L2J0 689 aaKnown RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PIM3Q86V86 326 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ARSGQ96EG1 525 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SLC35A4Q96G79 324 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 PARD6GQ9BYG4 376 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SERINC4A6NH21 518 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ARRB2P32121 409 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 HYAL2Q12891 473 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SCGB2A2Q13296 93 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TNFAIP8L2Q6P589 184 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 FAM110BQ8TC76 370 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 OR6C6A6NF89 314 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 ACY1Q03154 408 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 CBFBQ13951 182 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 OR5D18Q8NGL1 313 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 FBXL20Q96IG2 436 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 NAA11Q9BSU3 229 aaPredicted RBP3.42□□□□□ -1.86
SYNE1-207ENST00000367255 CH25HO95992 272 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 SYT14P1Q58G82 188 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 NGBQ9NPG2 151 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 STARD5Q9NSY2 213 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 RPH3ALQ9UNE2 315 aa3.42□□□□□ -1.86
SYNE1-207ENST00000367255 TRAV39A0A0B4J263 110 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms