RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 IGLV1-36A0A0B4J1U3 117 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 CEACAM18A8MTB9 384 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 DIRAS1O95057 198 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 FSTL3O95633 263 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 HSD17B1P14061 328 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 RPS2P15880 293 aaKnown RBP12.47□□□□□ -0.41
CTSD-202ENST00000367196 ERFP50548 548 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 FXYD6P3P58550 94 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 UBA52P62987 128 aaKnown RBP12.47□□□□□ -0.41
CTSD-202ENST00000367196 HLXQ14774 488 aaPredicted RBP12.47□□□□□ -0.41
CTSD-202ENST00000367196 RPL13AP3Q6NVV1 102 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 LRRN1Q6UXK5 716 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 NLRC3Q7RTR2 1065 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 DVL3Q92997 716 aaPredicted RBP12.47□□□□□ -0.41
CTSD-202ENST00000367196 ERGIC1Q969X5 290 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 MEGF10Q96KG7 1140 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 NMNAT3Q96T66 252 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 PITX2Q99697 317 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 ATF6BQ99941 703 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 ELAC2Q9BQ52 826 aaKnown RBP12.47□□□□□ -0.41
CTSD-202ENST00000367196 SLC30A2Q9BRI3 323 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 SSBP3Q9BWW4 388 aaPredicted RBP12.47□□□□□ -0.41
CTSD-202ENST00000367196 PLA2G12AQ9BZM1 189 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 SRA1Q9HD15 236 aaKnown RBP12.47□□□□□ -0.41
CTSD-202ENST00000367196 RPRD1BQ9NQG5 326 aaKnown RBP12.47□□□□□ -0.41
CTSD-202ENST00000367196 TMEM100Q9NV29 134 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 NDE1Q9NXR1 346 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 KCNG2Q9UJ96 466 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 B9D1Q9UPM9 204 aa12.47□□□□□ -0.41
CTSD-202ENST00000367196 DYNC1I1O14576 645 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 HLA-DQA2P01906 255 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 FABP3P05413 133 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 PPIAL4GP0DN37 164 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 RAD23AP54725 363 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 GNB2P62879 340 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 FOXL1Q12952 345 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 MEP1BQ16820 701 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 SAMD4BQ5PRF9 694 aaKnown RBP12.46□□□□□ -0.41
CTSD-202ENST00000367196 OTPQ5XKR4 325 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 OR6V1Q8N148 313 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 RNF148Q8N7C7 305 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 FAM86B1Q8N7N1 296 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 CELF2-AS1Q8N7Q2 184 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 ZDHHC22Q8N966 263 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 BHLHE23Q8NDY6 225 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 SLC26A10Q8NG04 563 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 OR52L1Q8NGH7 329 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 C22orf15Q8WYQ4 148 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 NSMCE2Q96MF7 247 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 TSSK2Q96PF2 358 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 FUZQ9BT04 418 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 C1QTNF5Q9BXJ0 243 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 SLC22A4Q9H015 551 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 MMP26Q9NRE1 261 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 PPIAL4AQ9Y536 164 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 V9GYQ6 96 aa12.46□□□□□ -0.41
CTSD-202ENST00000367196 TRAPPC2LH3BP13 241 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 DCTN6O00399 190 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 SEMG1P04279 462 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 HIST1H1CP16403 213 aaKnown RBP12.45□□□□□ -0.42
CTSD-202ENST00000367196 MTNR1AP48039 350 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 TPTEP56180 551 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 SEC61A1P61619 476 aaKnown RBP12.45□□□□□ -0.42
CTSD-202ENST00000367196 SPATS1Q496A3 300 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 AWAT1Q58HT5 328 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 SLC18B1Q6NT16 456 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 CORO6Q6QEF8 472 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 COLCA1Q6ZS62 124 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 DOK3Q7L591 496 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 ZBTB46Q86UZ6 589 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 PGAM4Q8N0Y7 254 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 LINC00471Q8N535 108 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 SIGLECL1Q8N7X8 197 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 OR8B3Q8NGG8 313 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 OR4C15Q8NGM1 316 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 OR11L1Q8NGX0 322 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 OR4K13Q8NH42 304 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 ZNF420Q8TAQ5 688 aaPredicted RBP12.45□□□□□ -0.42
CTSD-202ENST00000367196 GNPDA2Q8TDQ7 276 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 SPTSSAQ969W0 71 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 NEIL1Q96FI4 390 aaPredicted RBP12.45□□□□□ -0.42
CTSD-202ENST00000367196 OR8B2Q96RD0 313 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 MS4A7Q9GZW8 240 aaPredicted RBP12.45□□□□□ -0.42
CTSD-202ENST00000367196 ESM1Q9NQ30 184 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 CYB5R1Q9UHQ9 305 aa12.45□□□□□ -0.42
CTSD-202ENST00000367196 TENM1Q9UKZ4 2725 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 F5H5K5 113 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 SPRY1O43609 319 aaPredicted RBP12.44□□□□□ -0.42
CTSD-202ENST00000367196 KRT36O76013 467 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 GPANK1O95872 356 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 CYB5R3P00387 301 aaPredicted RBP12.44□□□□□ -0.42
CTSD-202ENST00000367196 WNT2P09544 360 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 ACSM4P0C7M7 580 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 ZNF823P16415 610 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 PRTN3P24158 256 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 RRM2P31350 389 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 GATA4P43694 442 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 TRAP1Q12931 704 aaKnown RBP12.44□□□□□ -0.42
CTSD-202ENST00000367196 TSPAN31Q12999 210 aa12.44□□□□□ -0.42
CTSD-202ENST00000367196 KCNJ8Q15842 424 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms