RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 FYTTD1Q96QD9 318 aaKnown RBP10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 HLA-DOBP13765 273 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 ANXA7P20073 488 aaKnown RBP10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 SUB1P53999 127 aaKnown RBP eCLIP10.94□□□□□ -0.668e-6■■■□□ 15.4
CDC42BPA-203ENST00000366766 Q8IYB0 196 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 ZDHHC22Q8N966 263 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 COA3Q9Y2R0 106 aaPredicted RBP10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 MDFIC2A0A1B0GVS7 189 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 NPY4RP50391 375 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 PCBP4P57723 403 aaKnown RBP10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 C1orf87Q8N0U7 546 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 PHYHIPLQ96FC7 376 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 NUDT22Q9BRQ3 303 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 RBM38Q9H0Z9 239 aaKnown RBP10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 CEACAM5P06731 702 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 LINC00346Q8IVM7 164 aa10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 MBNL1Q9NR56 388 aaKnown RBP10.94□□□□□ -0.66
CDC42BPA-203ENST00000366766 GP1BAP07359 652 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 RPL35P42766 123 aaKnown RBP10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 DHODHQ02127 395 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 RBM45Q8IUH3 476 aaKnown RBP10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 SMIM3Q9BZL3 60 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CACNA1EQ15878 2313 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 ICMTO60725 284 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 PRKRAO75569 313 aaKnown RBP10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 NKX2-2O95096 273 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 LYG2Q86SG7 212 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 K7EQM0 130 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 NME1P15531 152 aaKnown RBP10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 ZFP82Q8N141 532 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 SPICQ8N5J4 248 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 DMBX1Q8NFW5 382 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CNRIP1Q96F85 164 aaPredicted RBP10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 HRASLSQ9HDD0 168 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 HAO2Q9NYQ3 351 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 A4GNTQ9UNA3 340 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 ATP6V1G2-DDX39BF2Z307 99 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 DEFA6Q01524 100 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 TAF9Q16594 264 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 PRTGQ2VWP7 1150 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 TMEM128Q5BJH2 165 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 IL34Q6ZMJ4 242 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CATSPERDQ86XM0 798 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 PMS2P1A4D2B8 440 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 LGALS8O00214 317 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 DEGS1O15121 323 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 NKX2-1P43699 371 aaPredicted RBP10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CLN3Q13286 438 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 TAS2R4Q9NYW5 299 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 ASH2LQ9UBL3 628 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 A0A1W2PPC4 97 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 ANKUB1A6NFN9 424 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 UMAD1C9J7I0 102 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 H2AFB1P0C5Y9 115 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 PGFP49763 221 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 TMEM31Q5JXX7 168 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 H3F3CQ6NXT2 135 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 ABI3BPQ7Z7G0 1075 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 TMEM229BQ8NBD8 167 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 BBS1Q8NFJ9 593 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 OR4D6Q8NGJ1 314 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CA5BQ9Y2D0 317 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 KLF13Q9Y2Y9 288 aaPredicted RBP10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 PCDHGA5Q9Y5G8 931 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 AQP8O94778 261 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 PMP2P02689 132 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 HIST2H3PS2Q5TEC6 136 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 SYT13Q7L8C5 426 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 BHLHA9Q7RTU4 235 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 FAM71CQ8NEG0 241 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CT45A6P0DMU7 189 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CT45A5P0DMU8 189 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CT45A7P0DMV0 189 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CT45A8P0DMV1 189 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CT45A9P0DMV2 189 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 DGCR2P98153 550 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 B4GALNT1Q00973 533 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CT45A2Q5DJT8 189 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CT45A1Q5HYN5 189 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 SPEM1Q8N4L4 309 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 CT45A3Q8NHU0 189 aa10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 ZNF646O15015 1829 aaPredicted RBP10.93□□□□□ -0.66
CDC42BPA-203ENST00000366766 POM121CA8CG34 1229 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 LIPCP11150 499 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 STK11Q15831 433 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 CST9LP1Q5W188 147 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 PTCRAQ6ISU1 281 aaPredicted RBP10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 PARM1Q6UWI2 310 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 FJX1Q86VR8 437 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 TMEFF1Q8IYR6 380 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 OR2AE1Q8NHA4 323 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 RNF170Q96K19 258 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 SPTAN1Q13813 2472 aaKnown RBP10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 ANKRD34BA5PLL1 514 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 OIP5O43482 229 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 KIAA0040Q15053 153 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 FAHD2BQ6P2I3 314 aaPredicted RBP10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 CPEB2Q7Z5Q1 589 aaKnown RBP10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 OR51A4Q8NGJ6 313 aa10.92□□□□□ -0.66
CDC42BPA-203ENST00000366766 RLN3Q8WXF3 142 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms