RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 UBBP0CG47 229 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 UBCP0CG48 685 aaKnown RBP11.08□□□□□ -0.64
UBA3-202ENST00000361055 CTLA4P16410 223 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 CTRB1P17538 263 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 FBLP22087 321 aaKnown RBP11.08□□□□□ -0.64
UBA3-202ENST00000361055 RPS27AP62979 156 aaKnown RBP11.08□□□□□ -0.64
UBA3-202ENST00000361055 UBA52P62987 128 aaKnown RBP11.08□□□□□ -0.64
UBA3-202ENST00000361055 MFGE8Q08431 387 aaPredicted RBP11.08□□□□□ -0.64
UBA3-202ENST00000361055 ELAVL1Q15717 326 aaKnown RBP11.08□□□□□ -0.64
UBA3-202ENST00000361055 DCAF12Q5T6F0 453 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 C1orf189Q5VU69 101 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 CTRB2Q6GPI1 263 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 ARSKQ6UWY0 536 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 PRR22Q8IZ63 422 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 SLC38A9Q8NBW4 561 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 STK35Q8TDR2 534 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.08□□□□□ -0.64
UBA3-202ENST00000361055 FOXRED1Q96CU9 486 aaPredicted RBP11.08□□□□□ -0.64
UBA3-202ENST00000361055 SLC25A44Q96H78 314 aaPredicted RBP11.08□□□□□ -0.64
UBA3-202ENST00000361055 ZPBPQ9BS86 351 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 NUDT9Q9BW91 350 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 LDAHQ9H6V9 325 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 TAS2R4Q9NYW5 299 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 HHLA2Q9UM44 414 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 GTF2A1LQ9UNN4 478 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 TMED7Q9Y3B3 224 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 R4GMQ9 66 aa11.08□□□□□ -0.64
UBA3-202ENST00000361055 DMXL1Q9Y485 3027 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 LOC390937A0A1W2PQ73 354 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 ZNF736B4DX44 427 aaPredicted RBP11.07□□□□□ -0.64
UBA3-202ENST00000361055 LGALS8O00214 317 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 OR2T1O43869 369 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 RAD1O60671 282 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 CYB5AP00167 134 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 AMY2AP04746 511 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 JMJD7P0C870 316 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 SLC25A4P12235 298 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 HLA-GP17693 338 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 ATF4P18848 351 aaPredicted RBP11.07□□□□□ -0.64
UBA3-202ENST00000361055 RAB6AP20340 208 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 NOVA1P51513 510 aaKnown RBP11.07□□□□□ -0.64
UBA3-202ENST00000361055 PNLIPRP2P54317 469 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 GLO1Q04760 184 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 ETFDHQ16134 617 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 C1orf140Q5VVS0 124 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 HLA-DQA1Q5Y7H0 255 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 FAM122CQ6P4D5 195 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 POMZP3Q6PJE2 187 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 C5orf46Q6UWT4 87 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 ZNF704Q6ZNC4 412 aaPredicted RBP11.07□□□□□ -0.64
UBA3-202ENST00000361055 ADGRE4PQ86SQ3 457 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 BEST3Q8N1M1 668 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 OR52N5Q8NH56 324 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 TBL1XR1Q9BZK7 514 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 TINAGL1Q9GZM7 467 aaPredicted RBP11.07□□□□□ -0.64
UBA3-202ENST00000361055 GPN3Q9UHW5 284 aaPredicted RBP11.07□□□□□ -0.64
UBA3-202ENST00000361055 LRP12Q9Y561 859 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 OR5H14A6NHG9 310 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 NUDT14O95848 222 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 PLGP00747 810 aaPredicted RBP11.07□□□□□ -0.64
UBA3-202ENST00000361055 NAGAP17050 411 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 ACHEP22303 614 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 MPZP25189 248 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 DNASE1L1P49184 302 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 DCDP81605 110 aaKnown RBP11.07□□□□□ -0.64
UBA3-202ENST00000361055 PMPCAQ10713 525 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 MEF2DQ14814 521 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 EBPQ15125 230 aaKnown RBP11.07□□□□□ -0.64
UBA3-202ENST00000361055 ATPAF1Q5TC12 328 aaPredicted RBP11.07□□□□□ -0.64
UBA3-202ENST00000361055 ZNF385CQ66K41 422 aaPredicted RBP11.07□□□□□ -0.64
UBA3-202ENST00000361055 RAB12Q6IQ22 244 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 LIN54Q6MZP7 749 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 DEGS2Q6QHC5 323 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 LYPD6Q86Y78 171 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 GALNT16Q8N428 558 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 BPIFB2Q8N4F0 458 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 KCNRGQ8N5I3 272 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 PXT1Q8NFP0 134 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 STEAP2Q8NFT2 490 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 GPR119Q8TDV5 335 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 FOXN4Q96NZ1 517 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 TAAR9Q96RI9 348 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 AIFM2Q9BRQ8 373 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 FBXL2Q9UKC9 423 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 PTPRBP23467 1997 aa11.07□□□□□ -0.64
UBA3-202ENST00000361055 DCDC2BA2VCK2 349 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 DISC1C4P0D8 188 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 M0QYG6 137 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 OR2F2O95006 317 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 WDPCPO95876 746 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 ONECUT2O95948 504 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 FCER2P06734 321 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 CD96P40200 585 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 NR0B1P51843 470 aaKnown RBP11.06□□□□□ -0.64
UBA3-202ENST00000361055 OR2F1Q13607 317 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 ZNF273Q14593 569 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 PCK2Q16822 640 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 TMEM244Q5VVB8 128 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 OTPQ5XKR4 325 aa11.06□□□□□ -0.64
UBA3-202ENST00000361055 GRINAQ7Z429 371 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms