RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CLEC14AQ86T13 490 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 OR5M11Q96RB7 305 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 ZNF256Q9Y2P7 627 aaPredicted RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 CICQ96RK0 1608 aaPredicted RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 ELOA3CA0A087WX78 387 aaPredicted RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 CD68P34810 354 aaPredicted RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 SOWAHCQ53LP3 525 aaPredicted RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 MFSD9Q8NBP5 474 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 TAAR9Q96RI9 348 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 HOXC13P31276 330 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 CHST8Q9H2A9 424 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 OR5V1Q9UGF6 321 aa8.51□□□□□ -1.05
VPS13A-203ENST00000360280 TDRD6O60522 2096 aaKnown RBP8.51□□□□□ -1.05
VPS13A-203ENST00000360280 H3BVH4 76 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 GRPP07492 148 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 CDC20Q12834 499 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 NANOGP1Q8N7R0 232 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 GDE1Q9NZC3 331 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 CTSFQ9UBX1 484 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 CRISP2P16562 243 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 SRP9P49458 86 aaKnown RBP8.5□□□□□ -1.05
VPS13A-203ENST00000360280 GP2P55259 537 aaKnown RBP8.5□□□□□ -1.05
VPS13A-203ENST00000360280 MIDNQ504T8 468 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 C17orf78Q8N4C9 275 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 OR51F2Q8NH61 342 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 UBALD1Q8TB05 177 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 ARRDC2Q8TBH0 407 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 C1QTNF3Q9BXJ4 246 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 SLCO3A1Q9UIG8 710 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 KLRC4-KLRK1H3BQV0 150 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 DEDDO75618 318 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 RPA2P15927 270 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 LIPIQ6XZB0 460 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 SLC16A12Q6ZSM3 486 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 FAM71CQ8NEG0 241 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 RHBDD1Q8TEB9 315 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 ZNF480Q8WV37 535 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 TNFRSF13CQ96RJ3 184 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 UTS2O95399 124 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 GYPAP02724 150 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 RPLP1P05386 114 aaKnown RBP8.5□□□□□ -1.05
VPS13A-203ENST00000360280 PRSS56P0CW18 603 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 MLF1P58340 268 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 GPRIN1Q7Z2K8 1008 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 PIAS3Q9Y6X2 628 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 KNTC1P50748 2209 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 ALDOCP09972 364 aaKnown RBP8.5□□□□□ -1.05
VPS13A-203ENST00000360280 SDHAP31040 664 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 GDF7Q7Z4P5 450 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 RHOFQ9HBH0 211 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 HEMK1Q9Y5R4 338 aaPredicted RBP8.5□□□□□ -1.05
VPS13A-203ENST00000360280 A0A087X0M5 115 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 A0A1B0GX30 115 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 GLTPD2A6NH11 291 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 OR4E1P0C645 316 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 PIGPP57054 158 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 AANATQ16613 207 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 LMO3Q8TAP4 145 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 MAP1LC3CQ9BXW4 147 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 PIKFYVEQ9Y2I7 2098 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 ANKRD36A6QL64 1941 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 UBE2L5PA0A1B0GUS4 154 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 OPN1LWP04000 364 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 TGFBR1P36897 503 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 CTU1Q7Z7A3 348 aaKnown RBP8.5□□□□□ -1.05
VPS13A-203ENST00000360280 CALHM2Q9HA72 323 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 HSFX1Q9UBD0 423 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.5□□□□□ -1.05
VPS13A-203ENST00000360280 A0A087WV62 115 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 TMED7-TICAM2A0A0A6YYA0 188 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 PIAS2O75928 621 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 ANKRD34CP0C6C1 535 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 TRMT12Q53H54 448 aaKnown RBP8.5□□□□□ -1.05
VPS13A-203ENST00000360280 C19orf47Q8N9M1 422 aaKnown RBP8.5□□□□□ -1.05
VPS13A-203ENST00000360280 TMED7Q9Y3B3 224 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 GOSR1O95249 250 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 SDHBP21912 280 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 DEFB133Q30KQ1 61 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 BHLHE23Q8NDY6 225 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 GOT1L1Q8NHS2 421 aaPredicted RBP8.5□□□□□ -1.05
VPS13A-203ENST00000360280 UBTD2Q8WUN7 234 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 P4HTMQ9NXG6 502 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 BOLA1Q9Y3E2 137 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 FOCADQ5VW36 1801 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 FCN1O00602 326 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 SMIM6P0DI80 62 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 TMEM268Q5VZI3 342 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 COL1A1P02452 1464 aaPredicted RBP8.5□□□□□ -1.05
VPS13A-203ENST00000360280 SMIM21Q3B7S5 101 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 ARHGEF39Q8N4T4 335 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 CTSLP07711 333 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 NAT1P18440 290 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 EXT1Q16394 746 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 MAML2Q8IZL2 1156 aaPredicted RBP8.5□□□□□ -1.05
VPS13A-203ENST00000360280 OR52I2Q8NH67 350 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 HGDQ93099 445 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 LAMB2P55268 1798 aa8.5□□□□□ -1.05
VPS13A-203ENST00000360280 CLEC18AA5D8T8 446 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 HERVK_113P61574 105 aa8.49□□□□□ -1.05
VPS13A-203ENST00000360280 KIAA1958Q8N8K9 716 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms