RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 PROK2Q9HC23 129 aa12.34□□□□□ -0.43
CSNK1E-201ENST00000359867 EMC7Q9NPA0 242 aa12.34□□□□□ -0.43
CSNK1E-201ENST00000359867 ABI3Q9P2A4 366 aa12.34□□□□□ -0.43
CSNK1E-201ENST00000359867 NPIPA1Q9UND3 350 aa12.34□□□□□ -0.43
CSNK1E-201ENST00000359867 AK6Q9Y3D8 172 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-201ENST00000359867 TNRC6AQ8NDV7 1962 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-201ENST00000359867 SPENQ96T58 3664 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 H3BML4 177 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 SSX5O60225 188 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 HRGP04196 525 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 TPOP07202 933 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 HLA-DOBP13765 273 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 DNASE1L1P49184 302 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 HOXA1P49639 335 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 HSF1Q00613 529 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 MYBPHQ13203 477 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 ALKBH1Q13686 389 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 ZNF169Q14929 603 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 OR1C1Q15619 314 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 LIPNQ5VXI9 398 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 LRRC69Q6ZNQ3 347 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 STPG2Q8N412 459 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 JSRP1Q96MG2 331 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 C5orf34Q96MH7 638 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 RPH3AQ9Y2J0 694 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 NUBP2Q9Y5Y2 271 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 ANKRD61A6NGH8 418 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 ZNF879B4DU55 563 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 SHISA8B8ZZ34 492 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 HPXP02790 462 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 H2AFB2P0C5Z0 115 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 OR8G3PP0DMU2 310 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 SELLP14151 372 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 DNASE1P24855 282 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 SELENOPP49908 381 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 GLO1Q04760 184 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 MELKQ14680 651 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 ATRAIDQ6UW56 229 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 SLC35D2Q76EJ3 337 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 THEM6Q8WUY1 208 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 SGCZQ96LD1 299 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 RBP7Q96R05 134 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 PDCD1LG2Q9BQ51 273 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 CHIAQ9BZP6 476 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 SLC6A15Q9H2J7 730 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 HDGFL3Q9Y3E1 203 aa12.33□□□□□ -0.44
CSNK1E-201ENST00000359867 K7ENP7 123 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 LGALS8O00214 317 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 ZNF593O00488 134 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 GPR171O14626 319 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 HLA-DQA2P01906 255 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 IFNGR1P15260 489 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 CTLA4P16410 223 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 NUP62P37198 522 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 CASRP41180 1078 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 MAGEB1P43366 347 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 NANOS3P60323 173 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 MFAP5Q13361 173 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 ZNF239Q16600 458 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 GSG1Q2KHT4 349 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 INO80CQ6PI98 192 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 ZCCHC14Q8WYQ9 949 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 SORCS2Q96PQ0 1159 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 KCNK17Q96T54 332 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 LDAHQ9H6V9 325 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 DEPPQ9NTK1 212 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 IKZF2Q9UKS7 526 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 PRRC2CQ9Y520 2896 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 PIEZO2Q9H5I5 2752 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 PSMD9O00233 223 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 TMEM127O75204 238 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 ZNF432O94892 652 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 S100A6P06703 90 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 ZP1P60852 638 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 HSD17B12Q53GQ0 312 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 PDSS1Q5T2R2 415 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 CD276Q5ZPR3 534 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 SLC18B1Q6NT16 456 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 FDX2Q6P4F2 183 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 KDM8Q8N371 416 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 GTPBP8Q8N3Z3 284 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 ZNF454Q8N9F8 522 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 OR2M2Q96R28 347 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 REG4Q9BYZ8 158 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 TSPAN10Q9H1Z9 355 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 MRPL22Q9NWU5 206 aaKnown RBP12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 MED12Q93074 2177 aa12.32□□□□□ -0.44
CSNK1E-201ENST00000359867 RAB19A4D1S5 217 aa12.31□□□□□ -0.44
CSNK1E-201ENST00000359867 OR5H15A6NDH6 313 aa12.31□□□□□ -0.44
CSNK1E-201ENST00000359867 ZFPL1O95159 310 aa12.31□□□□□ -0.44
CSNK1E-201ENST00000359867 P04436 131 aa12.31□□□□□ -0.44
CSNK1E-201ENST00000359867 PTHLHP12272 177 aa12.31□□□□□ -0.44
CSNK1E-201ENST00000359867 DSCR4P56555 118 aaPredicted RBP12.31□□□□□ -0.44
CSNK1E-201ENST00000359867 ARG2P78540 354 aa12.31□□□□□ -0.44
CSNK1E-201ENST00000359867 POU3F1Q03052 451 aaPredicted RBP12.31□□□□□ -0.44
CSNK1E-201ENST00000359867 ETFDHQ16134 617 aa12.31□□□□□ -0.44
CSNK1E-201ENST00000359867 TMEM255AQ5JRV8 349 aa12.31□□□□□ -0.44
CSNK1E-201ENST00000359867 NHLRC1Q6VVB1 395 aa12.31□□□□□ -0.44
CSNK1E-201ENST00000359867 SERPINA12Q8IW75 414 aa12.31□□□□□ -0.44
CSNK1E-201ENST00000359867 OR5AK2Q8NH90 309 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms