RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 SUMO3P55854 103 aaPredicted RBP7.65□□□□□ -1.18
RFX3-202ENST00000358730 UNC119Q13432 240 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 PXDC1Q5TGL8 231 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 C3orf33Q6P1S2 294 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 ZNF813Q6ZN06 617 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 ANKRD37Q7Z713 158 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 LYPD6Q86Y78 171 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 PDZD9Q8IXQ8 264 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 GVQW1Q8N7I0 195 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 SPERTQ8NA61 448 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 OR5M9Q8NGP3 310 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 OR13C9Q8NGT0 318 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 NUDCD2Q8WVJ2 157 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 ADAT3Q96EY9 351 aaPredicted RBP7.65□□□□□ -1.18
RFX3-202ENST00000358730 PRRT1Q99946 306 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 EDEM2Q9BV94 578 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 FOXQ1Q9C009 403 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 SERINC1Q9NRX5 453 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 ALKBH4Q9NXW9 302 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 RAB22AQ9UL26 194 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 SRPK3Q9UPE1 567 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 POLR1DQ9Y2S0 133 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 HRH3Q9Y5N1 445 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 MTCH2Q9Y6C9 303 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 TRBV11-1A0A0K0K1C0 115 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 CPED1A4D0V7 1026 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 WIPF3A6NGB9 483 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 OR5H14A6NHG9 310 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 LIPT2A6NK58 231 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 LGALS8O00214 317 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 HEXBP07686 556 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 HSD11B1P28845 292 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 AGTR1P30556 359 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 ZNF41P51814 821 aaPredicted RBP7.65□□□□□ -1.18
RFX3-202ENST00000358730 CXADRP78310 365 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 ZNF260Q3ZCT1 412 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 SLC22A6Q4U2R8 563 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 PHF19Q5T6S3 580 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 OR52W1Q6IF63 320 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 OVCH2Q7RTZ1 564 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 SLC22A24Q8N4F4 322 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 OR1M1Q8NGA1 313 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 PBOV1Q9GZY1 135 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 TMEM185BQ9H7F4 350 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 PTGES2Q9H7Z7 377 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 MYOZ1Q9NP98 299 aaPredicted RBP7.65□□□□□ -1.18
RFX3-202ENST00000358730 IFT46Q9NQC8 304 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 COMMD9Q9P000 198 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 SEMA5BQ9P283 1151 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 SSUH2Q9Y2M2 353 aa7.65□□□□□ -1.18
RFX3-202ENST00000358730 A0A1B0GTI1 187 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 A8MXK9 166 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 KRBOX1C9JBD0 128 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 ZNF208O43345 1280 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 CD8AP01732 235 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 HOXD4P09016 255 aaPredicted RBP7.65□□□□□ -1.19
RFX3-202ENST00000358730 UBBP0CG47 229 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 IGFBP4P22692 258 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 RPS27AP62979 156 aaKnown RBP7.65□□□□□ -1.19
RFX3-202ENST00000358730 UBA52P62987 128 aaKnown RBP7.65□□□□□ -1.19
RFX3-202ENST00000358730 TAGLNQ01995 201 aaKnown RBP7.65□□□□□ -1.19
RFX3-202ENST00000358730 FGL1Q08830 312 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 BAMBIQ13145 260 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 TUSC1Q2TAM9 212 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 AWAT2Q6E213 333 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 RHBDD2Q6NTF9 364 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 LPCAT3Q6P1A2 487 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 COMMD2Q86X83 199 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 KMT5CQ86Y97 462 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 SLC25A45Q8N413 288 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 RELL2Q8NC24 303 aaPredicted RBP7.65□□□□□ -1.19
RFX3-202ENST00000358730 ZBTB8AQ96BR9 441 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 DMRTA2Q96SC8 542 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 PCED1AQ9H1Q7 454 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 ZNF768Q9H5H4 540 aaKnown RBP7.65□□□□□ -1.19
RFX3-202ENST00000358730 SLC2A8Q9NY64 477 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 PPP4R1LQ9P1A2 415 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 GPN3Q9UHW5 284 aaPredicted RBP7.65□□□□□ -1.19
RFX3-202ENST00000358730 B3GALT5Q9Y2C3 310 aa7.65□□□□□ -1.19
RFX3-202ENST00000358730 OR14I1A6ND48 311 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 BPNT1O95861 308 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 OPN1LWP04000 364 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 DCNP07585 359 aaKnown RBP7.64□□□□□ -1.19
RFX3-202ENST00000358730 VSIG8P0DPA2 414 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 FOSL2P15408 326 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 MGMTP16455 207 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 GNB3P16520 340 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 RAB3AP20336 220 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 HRH1P35367 487 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 CLDN6P56747 220 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 CLRN1P58418 232 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 MYBPHQ13203 477 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 PPP1R1AQ13522 171 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 COL19A1Q14993 1142 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 ATXN7L3Q14CW9 347 aaPredicted RBP7.64□□□□□ -1.19
RFX3-202ENST00000358730 SMAD2Q15796 467 aaKnown RBP7.64□□□□□ -1.19
RFX3-202ENST00000358730 TMEM81Q6P7N7 255 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 WDR74Q6RFH5 385 aaPredicted RBP7.64□□□□□ -1.19
RFX3-202ENST00000358730 CFAP77Q6ZQR2 320 aa7.64□□□□□ -1.19
RFX3-202ENST00000358730 PAQR4Q8N4S7 273 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms