RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 P04436 131 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 HIST1H1CP16403 213 aaKnown RBP8.02□□□□□ -1.13
COL6A6-201ENST00000358511 UBE2G2P60604 165 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF154Q13106 437 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 FAM71E1Q6IPT2 247 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 TUSC5Q8IXB3 177 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 DERL3Q96Q80 235 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 MAP3K3Q99759 626 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 ACTR3CQ9C0K3 210 aaPredicted RBP8.02□□□□□ -1.13
COL6A6-201ENST00000358511 SLC17A5Q9NRA2 495 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 DOCK10Q96BY6 2186 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 USF1P22415 310 aaPredicted RBP8.02□□□□□ -1.13
COL6A6-201ENST00000358511 HOXC13P31276 330 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF511Q8NB15 262 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 SLC22A12Q96S37 553 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 NPAS1Q99742 590 aa8.02□□□□□ -1.13
COL6A6-201ENST00000358511 SPTA1P02549 2419 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 KIR2DS1A0A191URI9 304 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 SERINC4A6NH21 518 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 NXPH3O95157 252 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 KIR2DS4P43632 304 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 RPL29P47914 159 aaKnown RBP8.01□□□□□ -1.13
COL6A6-201ENST00000358511 NOGQ13253 232 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 KIR2DS1Q14954 304 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 SLC25A35Q3KQZ1 300 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF628Q5EBL2 1059 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 LRRC18Q8N456 261 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 LHX4Q969G2 390 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 NUDT9Q9BW91 350 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 C11orf49Q9H6J7 331 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 NTNG1Q9Y2I2 539 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 TRAPPC1Q9Y5R8 145 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 TRAV36DV7A0A075B6V5 113 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 LOC107986453A0A1B0GWG9 222 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 GALR1P47211 349 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF595Q8IYB9 648 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 TM4SF18Q96CE8 201 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 FAM210BQ96KR6 192 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 SLC46A1Q96NT5 459 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 CASD1Q96PB1 797 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 PHF3Q92576 2039 aaKnown RBP8.01□□□□□ -1.13
COL6A6-201ENST00000358511 FGF18O76093 207 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 CPXM2Q8N436 756 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 PIGCQ92535 297 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 ARHGDIGQ99819 225 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 PLEKHF2Q9H8W4 249 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.01□□□□□ -1.13
COL6A6-201ENST00000358511 PRAMEF4O60810 478 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 NOVA1P51513 510 aaKnown RBP8.01□□□□□ -1.13
COL6A6-201ENST00000358511 LIPIQ6XZB0 460 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 TSACCQ96A04 125 aaPredicted RBP8.01□□□□□ -1.13
COL6A6-201ENST00000358511 LPAR4Q99677 370 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 UQCC1Q9NVA1 299 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 MTCH1Q9NZJ7 389 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 RALGAPA2Q2PPJ7 1873 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 PTPRDP23468 1912 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 K7EQM0 130 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 PSMB5P28074 263 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF761Q86XN6 746 aaPredicted RBP8.01□□□□□ -1.13
COL6A6-201ENST00000358511 OR52E1Q8NGJ3 308 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 CAPNS2Q96L46 248 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 FAM166BA8MTA8 275 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 RABIFP47224 123 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF92Q03936 586 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 DHRS2Q13268 280 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF626Q68DY1 528 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 TFAP2EQ6VUC0 442 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 TMEM229BQ8NBD8 167 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 MS4A10Q96PG2 267 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 POLEQ07864 2286 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 NSG1A0A0A6YYJ2 146 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 KLK8O60259 260 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 CCKARP32238 428 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 GABREP78334 506 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 RBM45Q8IUH3 476 aaKnown RBP8.01□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF2Q9BSG1 426 aaPredicted RBP8.01□□□□□ -1.13
COL6A6-201ENST00000358511 MMP24Q9Y5R2 645 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF320A2RRD8 509 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 LY86O95711 162 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 OPN1MWP04001 364 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 OPN1MW2P0DN77 364 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 OPN1MW3P0DN78 364 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 LIPNQ5VXI9 398 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 TCTN3Q6NUS6 607 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 DCXRQ7Z4W1 244 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 ZDHHC22Q8N966 263 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 HSD17B8Q92506 261 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 ZNF845Q96IR2 970 aaPredicted RBP8.01□□□□□ -1.13
COL6A6-201ENST00000358511 KCNJ15Q99712 375 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 MACROD1Q9BQ69 325 aa8.01□□□□□ -1.13
COL6A6-201ENST00000358511 SLC31A2O15432 143 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 HRO43593 1189 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 CD79AP11912 226 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 MFSD12Q6NUT3 480 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 SYT13Q7L8C5 426 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 FAM24BQ8N5W8 94 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 PLA2G12AQ9BZM1 189 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 TNFRSF12AQ9NP84 129 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 BET1LQ9NYM9 111 aa8□□□□□ -1.13
COL6A6-201ENST00000358511 TCRBV16S1A1N1A0A5B0 115 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms