RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 PITPNAQ00169 270 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 BDH1Q02338 343 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 RBM39Q14498 530 aaKnown RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 KCTD21Q4G0X4 260 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 ZBTB37Q5TC79 503 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 AP1ARQ63HQ0 302 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 RNF170Q96K19 258 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 SAP30LQ9HAJ7 183 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 IFT46Q9NQC8 304 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 HAO2Q9NYQ3 351 aa8.05□□□□□ -1.12
UPF2-202ENST00000357604 MRPL15Q9P015 296 aaKnown RBP8.05□□□□□ -1.12
UPF2-202ENST00000357604 FUT6P51993 359 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 ZNF91Q05481 1191 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 ETFDHQ16134 617 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 ZBTB46Q86UZ6 589 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 MUC15Q8N387 334 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 FAM46BQ96A09 425 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 TMIGD2Q96BF3 282 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 GAL3ST1Q99999 423 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 NXPH2O95156 264 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 ZNF35P13682 527 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 PPP2R2BQ00005 443 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 KCNMB1Q16558 191 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 ARMCX4Q5H9R4 360 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 TEX30Q5JUR7 227 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 CHST4Q8NCG5 386 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 OR8B4Q96RC9 309 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 P2RY10O00398 339 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 CCRL2O00421 344 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 GMDSO60547 372 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 GCM2O75603 506 aaPredicted RBP8.04□□□□□ -1.12
UPF2-202ENST00000357604 HTR3BO95264 441 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 NRASP01111 189 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 GPR6P46095 362 aaPredicted RBP8.04□□□□□ -1.12
UPF2-202ENST00000357604 NUDT16L1Q9BRJ7 211 aaKnown RBP8.04□□□□□ -1.12
UPF2-202ENST00000357604 ABHD6Q9BV23 337 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 STUB1Q9UNE7 303 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 TRAV38-1A0A0B4J264 116 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 CDC42EP2O14613 210 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 SYNGR3O43761 229 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 GRPP07492 148 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 HLA-DOBP13765 273 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 CTLA4P16410 223 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 BDKRB2P30411 391 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 GGTLC2Q14390 218 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 SPHARQ15513 63 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 CD276Q5ZPR3 534 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 ACSM5Q6NUN0 579 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 CEACAM19Q7Z692 300 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 TSEN54Q7Z6J9 526 aaKnown RBP8.04□□□□□ -1.12
UPF2-202ENST00000357604 TMEM123Q8N131 208 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 AMBNQ9NP70 447 aa8.04□□□□□ -1.12
UPF2-202ENST00000357604 ZNF318Q5VUA4 2279 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 NDUFB3O43676 98 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 MT-ND2P03891 347 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 TAB1Q15750 504 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 CORO6Q6QEF8 472 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 BAIAP2L2Q6UXY1 529 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 SLC36A1Q7Z2H8 476 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 CDC20BQ86Y33 519 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 SKA3Q8IX90 412 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 C10orf111Q8N326 155 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 TBC1D15Q8TC07 691 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 DACT3Q96B18 629 aaPredicted RBP8.03□□□□□ -1.12
UPF2-202ENST00000357604 LGALS12Q96DT0 336 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 VNN3Q9NY84 501 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 OR5B21A6NL26 309 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 CD53P19397 219 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 MTCP1P56278 107 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 SCN1BQ07699 218 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 FOXF2Q12947 444 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 ZNF426Q9BUY5 554 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 PLA2G12AQ9BZM1 189 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 UBAP1Q9NZ09 502 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 LPAR3Q9UBY5 353 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 EXOGQ9Y2C4 368 aaKnown RBP8.03□□□□□ -1.12
UPF2-202ENST00000357604 PNMA8CA0A1B0GUJ8 204 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 OR6C68A6NDL8 312 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 AIREO43918 545 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 ADRA2AP08913 450 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 GLRA1P23415 457 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 SOX2P48431 317 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 RBP2P50120 134 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 NCMAPQ5T1S8 102 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 DDI2Q5TDH0 399 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 OR52I1Q8NGK6 324 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 RHOXF1Q8NHV9 184 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 SLC25A40Q8TBP6 338 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 PP6455Q8WZ26 134 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 WFIKKN1Q96NZ8 548 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 TBCCD1Q9NVR7 557 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 NPIPB7O75200 414 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 DCTDP32321 178 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 GLRXP35754 106 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 ALKBH6Q3KRA9 238 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 Q499Y3 187 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 CDH24Q86UP0 819 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 MUL1Q969V5 352 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 MBOAT4Q96T53 435 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 CRIM1Q9NZV1 1036 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms