RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 IDO2Q6ZQW0 420 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 WDSUB1Q8N9V3 476 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 OR52N4Q8NGI2 321 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 PTX4Q96A99 478 aa19.36■□□□□ 0.69
SHMT1-202ENST00000352886 TRAF3IP2O43734 574 aaPredicted RBP19.35■□□□□ 0.69
SHMT1-202ENST00000352886 ADPRHL1Q8NDY3 354 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 OR4K17Q8NGC6 315 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 SLCO5A1Q9H2Y9 848 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 POFUT1Q9H488 388 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 MAB21L2Q9Y586 359 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 DKK1O94907 266 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 AMY2AP04746 511 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 ZNF35P13682 527 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 C4BPBP20851 252 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 CHMP1BQ7LBR1 199 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 OR1J2Q8NGS2 313 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 PNPLA2Q96AD5 504 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 TMPRSS13Q9BYE2 586 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 PTGES2Q9H7Z7 377 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 KLK13Q9UKR3 277 aa19.35■□□□□ 0.69
SHMT1-202ENST00000352886 TNRC6BQ9UPQ9 1833 aaKnown RBP19.35■□□□□ 0.69
SHMT1-202ENST00000352886 RAB6AP20340 208 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 PMS2CLQ68D20 193 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 OR1M1Q8NGA1 313 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 NAT6Q93015 286 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 UPB1Q9UBR1 384 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 PILRBQ9UKJ0 227 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 AUP1Q9Y679 476 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 METTL21EPA6NDL7 271 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 RAMP1O60894 148 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 HSD11B1P28845 292 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 CLDN6P56747 220 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 TMEM176BQ3YBM2 270 aaPredicted RBP19.34■□□□□ 0.69
SHMT1-202ENST00000352886 CLLU1Q5K131 121 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 DCAF12L2Q5VW00 463 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 OR2AJ1Q8NGZ0 328 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 ELP5Q8TE02 316 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 RAB22AQ9UL26 194 aa19.34■□□□□ 0.69
SHMT1-202ENST00000352886 CHCHD2Q9Y6H1 151 aaPredicted RBP19.34■□□□□ 0.69
SHMT1-202ENST00000352886 TMEM82A0PJX8 343 aa19.33■□□□□ 0.69
SHMT1-202ENST00000352886 ZNF736B4DX44 427 aaPredicted RBP19.33■□□□□ 0.69
SHMT1-202ENST00000352886 MCRIP1C9JLW8 97 aa19.33■□□□□ 0.69
SHMT1-202ENST00000352886 ZNF878C9JN71 531 aa19.33■□□□□ 0.69
SHMT1-202ENST00000352886 F5H5P2 479 aa19.33■□□□□ 0.69
SHMT1-202ENST00000352886 MELTFP08582 738 aa19.33■□□□□ 0.69
SHMT1-202ENST00000352886 KLK2P20151 261 aa19.33■□□□□ 0.69
SHMT1-202ENST00000352886 CAPZA1P52907 286 aa19.33■□□□□ 0.69
SHMT1-202ENST00000352886 CDH26Q8IXH8 852 aa19.33■□□□□ 0.69
SHMT1-202ENST00000352886 PAQR4Q8N4S7 273 aaPredicted RBP19.33■□□□□ 0.69
SHMT1-202ENST00000352886 OR51E1Q8TCB6 317 aa19.33■□□□□ 0.69
SHMT1-202ENST00000352886 FAM46BQ96A09 425 aa19.33■□□□□ 0.69
SHMT1-202ENST00000352886 SFXN2Q96NB2 322 aa19.33■□□□□ 0.69
SHMT1-202ENST00000352886 FARSAQ9Y285 508 aaKnown RBP19.33■□□□□ 0.69
SHMT1-202ENST00000352886 WIPF3A6NGB9 483 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 CELA2AP08217 269 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 ZNF28P17035 718 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 ZNF43P17038 809 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 UNC119Q13432 240 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 C11orf88Q6PI97 169 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 TMED4Q7Z7H5 227 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 SLC22A24Q8N4F4 322 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 FADS6Q8N9I5 356 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 OR5D14Q8NGL3 314 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 OR13C9Q8NGT0 318 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 OR2I1PQ8NGU4 316 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 IFI44Q8TCB0 444 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 CMBLQ96DG6 245 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 OXGR1Q96P68 337 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 SLC25A21Q9BQT8 299 aaPredicted RBP19.33■□□□□ 0.68
SHMT1-202ENST00000352886 ALX4Q9H161 411 aaPredicted RBP19.33■□□□□ 0.68
SHMT1-202ENST00000352886 GAREM1Q9H706 876 aa19.33■□□□□ 0.68
SHMT1-202ENST00000352886 RAB27BO00194 218 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 PRKXP51817 358 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 PCOLCEQ15113 449 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 TOR2AQ5JU69 321 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 ZNF584Q8IVC4 421 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 OR4S1Q8NGB4 309 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 OR6X1Q8NH79 312 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 AQP3Q92482 292 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 ASH2LQ9UBL3 628 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 ARPC5O15511 151 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 OR4E1P0C645 316 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 ZNF735P0CB33 412 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 FGF5P12034 268 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 RAB14P61106 215 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 SEC61A1P61619 476 aaKnown RBP19.32■□□□□ 0.68
SHMT1-202ENST00000352886 RAB12Q6IQ22 244 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 SLC25A47Q6Q0C1 308 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 BPIFB2Q8N4F0 458 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 SLC25A43Q8WUT9 341 aaPredicted RBP19.32■□□□□ 0.68
SHMT1-202ENST00000352886 CCDC107Q8WV48 283 aa19.32■□□□□ 0.68
SHMT1-202ENST00000352886 FRYLO94915 3013 aa19.31■□□□□ 0.68
SHMT1-202ENST00000352886 CD74P04233 296 aa19.31■□□□□ 0.68
SHMT1-202ENST00000352886 SLC2A1P11166 492 aa19.31■□□□□ 0.68
SHMT1-202ENST00000352886 RAB3AP20336 220 aa19.31■□□□□ 0.68
SHMT1-202ENST00000352886 PRKACBP22694 351 aa19.31■□□□□ 0.68
SHMT1-202ENST00000352886 TAF13Q15543 124 aa19.31■□□□□ 0.68
SHMT1-202ENST00000352886 ZNF260Q3ZCT1 412 aa19.31■□□□□ 0.68
SHMT1-202ENST00000352886 SCGB2B2Q4G0G5 96 aa19.31■□□□□ 0.68
SHMT1-202ENST00000352886 B3GNTL1Q67FW5 361 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms