RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 INTS14Q96SY0 518 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 CIB1Q99828 191 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 PIMREGQ9BSJ6 248 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 OR51V1Q9H2C8 321 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 ENOPH1Q9UHY7 261 aa18.84■□□□□ 0.61
SNX3-202ENST00000349379 PURGQ9UJV8 347 aaKnown RBP18.84■□□□□ 0.61
SNX3-202ENST00000349379 MT-ND5P03915 603 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 NR4A2P43354 598 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 MRPS11P82912 194 aaKnown RBP18.83■□□□□ 0.6
SNX3-202ENST00000349379 EFNB1P98172 346 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 RIN1Q13671 783 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 SNAPC1Q16533 368 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 SLC35D3Q5M8T2 416 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 C12orf73Q69YU5 71 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 FBXW12Q6X9E4 464 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 C10orf67Q8IYJ2 551 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 BBS1Q8NFJ9 593 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 OR5L1Q8NGL2 311 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 OTULINQ96BN8 352 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 HAVCR1Q96D42 359 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 CYSLTR2Q9NS75 346 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 TVP23BQ9NYZ1 205 aa18.83■□□□□ 0.6
SNX3-202ENST00000349379 ZSCAN5BA6NJL1 495 aa18.82■□□□□ 0.6
SNX3-202ENST00000349379 SAC3D1A6NKF1 404 aa18.82■□□□□ 0.6
SNX3-202ENST00000349379 F5H5K5 113 aa18.82■□□□□ 0.6
SNX3-202ENST00000349379 RAC2P15153 192 aa18.82■□□□□ 0.6
SNX3-202ENST00000349379 IGFBP5P24593 272 aa18.82■□□□□ 0.6
SNX3-202ENST00000349379 ZNF81P51508 661 aa18.82■□□□□ 0.6
SNX3-202ENST00000349379 CXXC5Q7LFL8 322 aaKnown RBP18.82■□□□□ 0.6
SNX3-202ENST00000349379 DPY19L4Q7Z388 723 aa18.82■□□□□ 0.6
SNX3-202ENST00000349379 ERI1Q8IV48 349 aaKnown RBP18.82■□□□□ 0.6
SNX3-202ENST00000349379 CMBLQ96DG6 245 aa18.82■□□□□ 0.6
SNX3-202ENST00000349379 SLAMF6Q96DU3 332 aa18.82■□□□□ 0.6
SNX3-202ENST00000349379 ZMYND19Q96E35 227 aaPredicted RBP18.82■□□□□ 0.6
SNX3-202ENST00000349379 PLEKHA8Q96JA3 519 aa18.82■□□□□ 0.6
SNX3-202ENST00000349379 GABARAPL3Q9BY60 117 aa18.82■□□□□ 0.6
SNX3-202ENST00000349379 BPESC1Q9GZL8 116 aa18.82■□□□□ 0.6
SNX3-202ENST00000349379 ABCA2Q9BZC7 2435 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 ZNF878C9JN71 531 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 LYNX1G3V0Z9 82 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 M0R135 149 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 PRKYO43930 277 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 IGHV1-46P01743 117 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 LYNX1P0DP58 116 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 TPTEP56180 551 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 FAM209AQ5JX71 171 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 NAA40Q86UY6 237 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 ZNF540Q8NDQ6 660 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 OR6N2Q8NGY6 317 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 RDH5Q92781 318 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 YIPF5Q969M3 257 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 SPTSSAQ969W0 71 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 ZNF799Q96GE5 643 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 RBM4BQ9BQ04 359 aaKnown RBP18.81■□□□□ 0.6
SNX3-202ENST00000349379 PRRG3Q9BZD7 231 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 S100A14Q9HCY8 104 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 PTTG3PQ9NZH4 202 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 DYSFO75923 2080 aa18.81■□□□□ 0.6
SNX3-202ENST00000349379 NSD1Q96L73 2696 aaPredicted RBP18.81■□□□□ 0.6
SNX3-202ENST00000349379 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.8■□□□□ 0.63e-11■■■■■ 37.2
SNX3-202ENST00000349379 PLSCR5A0PG75 271 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 CCDC182A6NF36 153 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 TIMM8AO60220 97 aaPredicted RBP18.8■□□□□ 0.6
SNX3-202ENST00000349379 RP2O75695 350 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 CD55P08174 381 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 ACHEP22303 614 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 USF1P22415 310 aaPredicted RBP18.8■□□□□ 0.6
SNX3-202ENST00000349379 COL8A2P25067 703 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 CARTPTQ16568 116 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 KLHL12Q53G59 568 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 ZMAT1Q5H9K5 638 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 RHOUQ7L0Q8 258 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 SHFQ7M4L6 423 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 RNF133Q8WVZ7 376 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 KCNJ15Q99712 375 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 ABHD6Q9BV23 337 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 CHODLQ9H9P2 273 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 MALRD1Q5VYJ5 2156 aa18.8■□□□□ 0.6
SNX3-202ENST00000349379 IGHV4-61A0A0C4DH41 118 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 SELENOFO60613 162 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 ALPLP05186 524 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 TACSTD2P09758 323 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 ANOS1P23352 680 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 CCL8P80075 99 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 CDK5R2Q13319 367 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 EIF2B1Q14232 305 aaKnown RBP18.79■□□□□ 0.6
SNX3-202ENST00000349379 HLXQ14774 488 aaPredicted RBP18.79■□□□□ 0.6
SNX3-202ENST00000349379 TMEM249Q2WGJ8 235 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 DRAM2Q6UX65 266 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 Q6ZR03 302 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 OTOSQ8NHW6 89 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 DIRC2Q96SL1 478 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 AMELYQ99218 206 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 COPS4Q9BT78 406 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 MSL2Q9HCI7 577 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 USE1Q9NZ43 259 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 ZDHHC8Q9ULC8 765 aa18.79■□□□□ 0.6
SNX3-202ENST00000349379 FN1P02751 2386 aaKnown RBP18.79■□□□□ 0.6
SNX3-202ENST00000349379 SPRY3O43610 288 aa18.78■□□□□ 0.6
SNX3-202ENST00000349379 LCATP04180 440 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms