RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 TXNL1O43396 289 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 BPNT1O95861 308 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 THBS2P35442 1172 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 MPLP40238 635 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 PDZK1IP1Q13113 114 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 CAMK2BQ13554 666 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 PWWP2BQ6NUJ5 590 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 CCDC54Q8NEL0 328 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 CXorf58Q96LI9 332 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 FLRT3Q9NZU0 649 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 CLEC1BQ9P126 229 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 CES1P1Q9UKY3 287 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 LOXL2Q9Y4K0 774 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 TMEM272A0A1B0GTI8 110 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 KLRC4-KLRK1H3BQV0 150 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 CT62P0C5K7 136 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 TBPP20226 339 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 CPT2P23786 658 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 HSF1Q00613 529 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 NUMA1Q14980 2115 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 PAN3Q58A45 887 aaKnown RBP13.31□□□□□ -0.28
NUP50-201ENST00000347635 CMTM1Q8IZ96 169 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 LRRC18Q8N456 261 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 C10orf90Q96M02 699 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 CDKN2AP42771 156 aaKnown RBP13.31□□□□□ -0.28
NUP50-201ENST00000347635 CORO6Q6QEF8 472 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 ZNF709Q8N972 641 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 EXD3Q8N9H8 876 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 OR10Z1Q8NGY1 313 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 SLC25A31Q9H0C2 315 aa13.31□□□□□ -0.28
NUP50-201ENST00000347635 NXF5Q9H1B4 397 aaKnown RBP13.31□□□□□ -0.28
NUP50-201ENST00000347635 CCDC187A0A096LP49 1063 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 FRG2CA6NGY1 282 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 RAB5CP51148 216 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 CLDN17P56750 224 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 TMEM81Q6P7N7 255 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 ZNF681Q96N22 645 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 OR11A1Q9GZK7 315 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.3□□□□□ -0.28
NUP50-201ENST00000347635 PATJQ8NI35 1801 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 F5P12259 2224 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 SRYQ05066 204 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 KCNAB1Q14722 419 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 TMEM176BQ3YBM2 270 aaPredicted RBP13.3□□□□□ -0.28
NUP50-201ENST00000347635 NPSR1Q6W5P4 371 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 BAP18Q8IXM2 172 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 PRSS35Q8N3Z0 413 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 OR51E1Q8TCB6 317 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 CCDC74BQ96LY2 380 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 ZNF286AQ9HBT8 521 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 CHRNA9Q9UGM1 479 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 ST6GALNAC2Q9UJ37 374 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 TOX3O15405 576 aaPredicted RBP13.3□□□□□ -0.28
NUP50-201ENST00000347635 AKR7A3O95154 331 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 APOBEC1P41238 236 aaKnown RBP13.3□□□□□ -0.28
NUP50-201ENST00000347635 MTCP1P56278 107 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 SLC35A1P78382 337 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 NKX6-1P78426 367 aaPredicted RBP13.3□□□□□ -0.28
NUP50-201ENST00000347635 PRTGQ2VWP7 1150 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 Q7L0L9 218 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 SFTPA1Q8IWL2 248 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 GALNT16Q8N428 558 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 ABHD6Q9BV23 337 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 LHX9Q9NQ69 397 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 C2orf72A6NCS6 295 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 TAAR5O14804 337 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 ZNF141Q15928 474 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 UQCC3Q6UW78 93 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 BEND4Q6ZU67 534 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 RPS19BP1Q86WX3 136 aaKnown RBP13.3□□□□□ -0.28
NUP50-201ENST00000347635 STT3BQ8TCJ2 826 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 C4orf45Q96LM5 186 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 PIGQQ9BRB3 760 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 CHST11Q9NPF2 352 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 LRFN1Q9P244 771 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 NDRG3Q9UGV2 375 aa13.3□□□□□ -0.28
NUP50-201ENST00000347635 EIF1BO60739 113 aaKnown RBP13.29□□□□□ -0.28
NUP50-201ENST00000347635 ERGP11308 486 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 EPHA8P29322 1005 aaPredicted RBP13.29□□□□□ -0.28
NUP50-201ENST00000347635 OR4C3Q8NH37 302 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 RNF128Q8TEB7 428 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 OR5B12Q96R08 314 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 TMEM231Q9H6L2 316 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 A0A1B0GTH9 108 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 SLC2A1P11166 492 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 EPHA1P21709 976 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 RPL19P84098 196 aaKnown RBP13.29□□□□□ -0.28
NUP50-201ENST00000347635 GPR157Q5UAW9 335 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 FBXW12Q6X9E4 464 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 OR1S1Q8NH92 325 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 SLC25A43Q8WUT9 341 aaPredicted RBP13.29□□□□□ -0.28
NUP50-201ENST00000347635 HSD17B8Q92506 261 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 NUDT9Q9BW91 350 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 B3GALT5Q9Y2C3 310 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 PCDHGA9Q9Y5G4 932 aaKnown RBP13.29□□□□□ -0.28
NUP50-201ENST00000347635 OR2W5A6NFC9 320 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 CBX7O95931 251 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 ZNF728P0DKX0 622 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 ALOX5APP20292 161 aa13.29□□□□□ -0.28
NUP50-201ENST00000347635 CYB561P49447 251 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms