RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ACSM4P0C7M7 580 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 CECR9P0C854 216 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 HSMCR30P0CW71 290 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 COX5BP10606 129 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 PSMB9P28065 219 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 HSD11B1P28845 292 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 KIR3DL2P43630 455 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 ALDH3B2P48448 385 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 CX3CR1P49238 355 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 GBX2P52951 348 aaPredicted RBP16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 PLP2Q04941 152 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 ECH1Q13011 328 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 PRSS45Q7RTY3 260 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 WFDC8Q8IUA0 241 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 ALDH16A1Q8IZ83 802 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 PRSS35Q8N3Z0 413 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 ZNF283Q8N7M2 679 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 MUCL1Q96DR8 90 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 COG8Q96MW5 612 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 MGLLQ99685 303 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 BRD7Q9NPI1 651 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 FAM206AQ9NX38 181 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 ZNF319Q9P2F9 582 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 SCOCQ9UIL1 159 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 SLC22A13Q9Y226 551 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 R4GMQ9 66 aa16.48■□□□□ 0.23
CHMP4A-201ENST00000347519 M0R135 149 aa16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 ZNF121P58317 390 aaPredicted RBP16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 PSMA6P60900 246 aaKnown RBP16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 TIGD6Q17RP2 521 aa16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 ARMCX4Q5H9R4 360 aa16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 SYT6Q5T7P8 510 aaPredicted RBP16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 SLC30A7Q8NEW0 376 aa16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 IL17RDQ8NFM7 739 aa16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 FCGR1BQ92637 280 aa16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 ZNF799Q96GE5 643 aa16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 G6PC2Q9NQR9 355 aa16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 FRRS1LQ9P0K9 344 aa16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 ATPIF1Q9UII2 106 aa16.47■□□□□ 0.23
CHMP4A-201ENST00000347519 TMEM269A0A1B0GVZ9 245 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 C5orf49A4QMS7 147 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 M0R1B8 84 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 OGG1O15527 345 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 CCNOP22674 350 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 DCTDP32321 178 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 WNT5AP41221 380 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 GDI2P50395 445 aaKnown RBP16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 SORDQ00796 357 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 ACSM1Q08AH1 577 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 MLLT11Q13015 90 aaPredicted RBP16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 SSX1Q16384 188 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 TSTQ16762 297 aaKnown RBP16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 WDR38Q5JTN6 314 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 FDX2Q6P4F2 183 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 CATSPERDQ86XM0 798 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 EGFL6Q8IUX8 553 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 FAM169BQ8N8A8 192 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 OR2G2Q8NGZ5 317 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 RPS4Y2Q8TD47 263 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 SPTSSAQ969W0 71 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 C4orf45Q96LM5 186 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 DOK1Q99704 481 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 USB1Q9BQ65 265 aaKnown RBP16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 NIPAL2Q9H841 368 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 ISYNA1Q9NPH2 558 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 N6AMT1Q9Y5N5 214 aa16.46■□□□□ 0.23
CHMP4A-201ENST00000347519 FLNCQ14315 2725 aa16.46■□□□□ 0.22
CHMP4A-201ENST00000347519 PPP3CBP16298 524 aa16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 CALCRP30988 508 aa16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 APLNRP35414 380 aa16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 LIPAP38571 399 aa16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 TGM4P49221 684 aa16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 TPTEP56180 551 aa16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 ALKBH1Q13686 389 aaKnown RBP16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 CDK5R1Q15078 307 aa16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 DMKNQ6E0U4 476 aaPredicted RBP16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 FAM57BQ71RH2 274 aa16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 LRRC46Q96FV0 321 aa16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 MYCBPQ99417 103 aaPredicted RBP16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 MED18Q9BUE0 208 aa16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 TRIM36Q9NQ86 728 aa16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 OR52A1Q9UKL2 312 aa16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 SPTBN1Q01082 2364 aaKnown RBP16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 HEATR1Q9H583 2144 aaKnown RBP16.45■□□□□ 0.22
CHMP4A-201ENST00000347519 CLEC18AA5D8T8 446 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 OR4C45A6NMZ5 311 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 CYSRT1A8MQ03 144 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 LOC110117498-PIK3R3F6TDL0 507 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 ANXA2P07355 339 aaKnown RBP16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 SLC6A9P48067 706 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 MMP16P51512 607 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 NR1H2P55055 460 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 TPBGQ13641 420 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 ZNF829Q3KNS6 432 aaPredicted RBP16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 SNAI3Q3KNW1 292 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 LIPKQ5VXJ0 399 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 RPL22L1Q6P5R6 122 aaKnown RBP16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 ARL9Q6T311 187 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 DRAM2Q6UX65 266 aa16.44■□□□□ 0.22
CHMP4A-201ENST00000347519 CLEC18BQ6UXF7 455 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms