RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 TMED7-TICAM2A0A0A6YYA0 188 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 AGERQ15109 404 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 CYHR1Q6ZMK1 362 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 HGDQ93099 445 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 CASD1Q96PB1 797 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 ARHGDIGQ99819 225 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 GPR87Q9BY21 358 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 SIRT3Q9NTG7 399 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-202ENST00000345356 APOBEC3BQ9UH17 382 aaKnown RBP11.01□□□□□ -0.65
COL12A1-202ENST00000345356 TMED7Q9Y3B3 224 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 GJE1A6NN92 205 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 EGR3Q06889 387 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 ASTLQ6HA08 431 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-202ENST00000345356 HTR3DQ70Z44 454 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 SLC38A9Q8NBW4 561 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 ABHD5Q8WTS1 349 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 TRMT61AQ96FX7 289 aaKnown RBP11.01□□□□□ -0.65
COL12A1-202ENST00000345356 ZNF426Q9BUY5 554 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 HIPK2Q9H2X6 1198 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 OR51B6Q9H340 312 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 RCL1Q9Y2P8 373 aaKnown RBP11.01□□□□□ -0.65
COL12A1-202ENST00000345356 A0A1W2PNV4 684 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 MED19A0JLT2 244 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-202ENST00000345356 RPLP1P05386 114 aaKnown RBP11.01□□□□□ -0.65
COL12A1-202ENST00000345356 MED25Q71SY5 747 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 MYADML2A6NDP7 307 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 SIGLEC5O15389 551 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 CST5P28325 142 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-202ENST00000345356 HTRA3P83110 453 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 SIGLEC14Q08ET2 396 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 TRMT12Q53H54 448 aaKnown RBP11.01□□□□□ -0.65
COL12A1-202ENST00000345356 ZDHHC22Q8N966 263 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 KCNIP2Q9NS61 270 aa11.01□□□□□ -0.65
COL12A1-202ENST00000345356 TRBV23-1A0A0A0MS06 115 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 SLC17A2O00624 439 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 F12P00748 615 aaPredicted RBP11□□□□□ -0.65
COL12A1-202ENST00000345356 ACAA1P09110 424 aaPredicted RBP11□□□□□ -0.65
COL12A1-202ENST00000345356 GABRA2P47869 451 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 PIGPP57054 158 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 SELENOVP59797 346 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 USP53Q70EK8 1073 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 SAT2Q96F10 170 aaPredicted RBP11□□□□□ -0.65
COL12A1-202ENST00000345356 SLC46A1Q96NT5 459 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 POMT1Q9Y6A1 747 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 M0QZK8 103 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 GGCTO75223 188 aaKnown RBP11□□□□□ -0.65
COL12A1-202ENST00000345356 UTS2O95399 124 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 PMCHP20382 165 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 PTGER4P35408 488 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 HTR5AP47898 357 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 RPL34P49207 117 aaKnown RBP11□□□□□ -0.65
COL12A1-202ENST00000345356 RPL27P61353 136 aaKnown RBP11□□□□□ -0.65
COL12A1-202ENST00000345356 PLA1AQ53H76 456 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 SPANXN5Q5MJ07 72 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 MR1Q95460 341 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 IL22RA2Q969J5 263 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 OR5V1Q9UGF6 321 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 PIGLQ9Y2B2 252 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 A0A1W2PR48 441 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 C9orf170A2RU37 121 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 TRAF3IP2O43734 574 aaPredicted RBP11□□□□□ -0.65
COL12A1-202ENST00000345356 NMBP08949 121 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 P2RY2P41231 377 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 PPP1CBP62140 327 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 DUSP8Q13202 625 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 RAB32Q13637 225 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 OR51E1Q8TCB6 317 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 GPX8Q8TED1 209 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 STACQ99469 402 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 TIMM29Q9BSF4 260 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 ACTR3CQ9C0K3 210 aaPredicted RBP11□□□□□ -0.65
COL12A1-202ENST00000345356 CRYBG1Q9Y4K1 1723 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 TGM5O43548 720 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 HSF1Q00613 529 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 VWA2Q5GFL6 755 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 IL22RA1Q8N6P7 574 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 OR51M1Q9H341 326 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 SEMA6CQ9H3T2 930 aa11□□□□□ -0.65
COL12A1-202ENST00000345356 RGPD8O14715 1765 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-202ENST00000345356 GALR1P47211 349 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 PCP4P48539 62 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 SULT1A1P50225 295 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 HNRNPA1L2Q32P51 320 aaKnown RBP10.99□□□□□ -0.65
COL12A1-202ENST00000345356 TMEM104Q8NE00 496 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 SNX22Q96L94 193 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 C11orf49Q9H6J7 331 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 ING1Q9UK53 422 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-202ENST00000345356 INSL6Q9Y581 213 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 DNAJC25-GNG10A0A024R161 153 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 NSG1A0A0A6YYJ2 146 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 KLKB1P03952 638 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 CTSAP10619 480 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 MAT1AQ00266 395 aaKnown RBP10.99□□□□□ -0.65
COL12A1-202ENST00000345356 SRYQ05066 204 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 SLC10A1Q14973 349 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 RTN4IP1Q8WWV3 396 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-202ENST00000345356 CTDSP1Q9GZU7 261 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 LANCL1O43813 399 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 OPRM1P35372 400 aa10.99□□□□□ -0.65
COL12A1-202ENST00000345356 GUCA2BQ16661 112 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms