RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 LRFN1Q9P244 771 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 COPS3Q9UNS2 423 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 MRPS18CQ9Y3D5 142 aaKnown RBP11.43□□□□□ -0.58
CLK3-201ENST00000345005 TMEM14AQ9Y6G1 99 aa11.43□□□□□ -0.58
CLK3-201ENST00000345005 CNOT1A5YKK6 2376 aaKnown RBP11.43□□□□□ -0.58
CLK3-201ENST00000345005 LOC102725191A0A1B0GVB3 256 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 A0A1B0GVC2 190 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 OR2M5A3KFT3 312 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 A6NIN4 97 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 PHYHO14832 338 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 RP2O75695 350 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 HPXP02790 462 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 ACSM4P0C7M7 580 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 PPP3CBP16298 524 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 EDNRAP25101 427 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 CD96P40200 585 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 ART1P52961 327 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 TOMM20Q15388 145 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 ZNF626Q68DY1 528 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 TMEM225Q6GV28 225 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 DNM1P34Q6PK57 102 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 UEVLDQ8IX04 471 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 RFLNBQ8N5W9 214 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 LGALS14Q8TCE9 139 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 PELI1Q96FA3 418 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 OXGR1Q96P68 337 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 GNG8Q9UK08 70 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 RCE1Q9Y256 329 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 ZNF281Q9Y2X9 895 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 V9GY05 133 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 SPTBN4Q9H254 2564 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 IGLV1-36A0A0B4J1U3 117 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 CIB4A0PJX0 185 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 TVP23AA6NH52 213 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 GJE1A6NN92 205 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 MCRIP1C9JLW8 97 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 AQP8O94778 261 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 NDUFB6O95139 128 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 S100A11P31949 105 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 SELENOPP49908 381 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 RAC1P63000 192 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 SSBP1Q04837 148 aaKnown RBP11.42□□□□□ -0.58
CLK3-201ENST00000345005 RGS7BPQ6MZT1 257 aaPredicted RBP11.42□□□□□ -0.58
CLK3-201ENST00000345005 NHLRC1Q6VVB1 395 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 HSD17B13Q7Z5P4 300 aaPredicted RBP11.42□□□□□ -0.58
CLK3-201ENST00000345005 DTX3Q8N9I9 347 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 BEST4Q8NFU0 473 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 OR6N2Q8NGY6 317 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 RPS4Y2Q8TD47 263 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 KCNE4Q8WWG9 221 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 KCNK17Q96T54 332 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 SHARPINQ9H0F6 387 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 ASCL3Q9NQ33 180 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 LAMP5Q9UJQ1 280 aa11.42□□□□□ -0.58
CLK3-201ENST00000345005 A0A0G2JMM0 328 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 A0A1W2PPB8 328 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 A0A1W2PRS3 328 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 AQP7P3A6NL99 342 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 KIR3DP1A8MWS1 328 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 TM4SF5O14894 197 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 EIF1BO60739 113 aaKnown RBP11.41□□□□□ -0.58
CLK3-201ENST00000345005 HLA-DQA2P01906 255 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 ALDOBP05062 364 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 CTLA4P16410 223 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 P2RY4P51582 365 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 SEC61A1P61619 476 aaKnown RBP11.41□□□□□ -0.58
CLK3-201ENST00000345005 CSNK2A1P68400 391 aaPredicted RBP11.41□□□□□ -0.58
CLK3-201ENST00000345005 FLI1Q01543 452 aaPredicted RBP11.41□□□□□ -0.58
CLK3-201ENST00000345005 GLO1Q04760 184 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 ZNF684Q5T5D7 378 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 SFRP4Q6FHJ7 346 aaPredicted RBP11.41□□□□□ -0.58
CLK3-201ENST00000345005 LINC00469Q8N7U9 141 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 HAVCR1Q96D42 359 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 FAM173AQ9BQD7 235 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 NAA11Q9BSU3 229 aaPredicted RBP11.41□□□□□ -0.58
CLK3-201ENST00000345005 TTTY10Q9BZA0 68 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 TSPAN10Q9H1Z9 355 aaPredicted RBP11.41□□□□□ -0.58
CLK3-201ENST00000345005 OR10A4Q9H209 315 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 LDAHQ9H6V9 325 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 MED29Q9NX70 200 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 NKIRAS2Q9NYR9 191 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 B3GAT1Q9P2W7 334 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 ING1Q9UK53 422 aaPredicted RBP11.41□□□□□ -0.58
CLK3-201ENST00000345005 BOKQ9UMX3 212 aaPredicted RBP11.41□□□□□ -0.58
CLK3-201ENST00000345005 AK6Q9Y3D8 172 aaKnown RBP11.41□□□□□ -0.58
CLK3-201ENST00000345005 CACNA1CQ13936 2221 aa11.41□□□□□ -0.58
CLK3-201ENST00000345005 A8MXK9 166 aa11.4□□□□□ -0.58
CLK3-201ENST00000345005 G3V3Q6 166 aa11.4□□□□□ -0.58
CLK3-201ENST00000345005 ARPC1BO15143 372 aaKnown RBP11.4□□□□□ -0.58
CLK3-201ENST00000345005 MAGEB4O15481 346 aaPredicted RBP11.4□□□□□ -0.58
CLK3-201ENST00000345005 CFDP00746 253 aaPredicted RBP11.4□□□□□ -0.58
CLK3-201ENST00000345005 LIPCP11150 499 aa11.4□□□□□ -0.58
CLK3-201ENST00000345005 VEGFCP49767 419 aa11.4□□□□□ -0.58
CLK3-201ENST00000345005 BIDP55957 195 aa11.4□□□□□ -0.58
CLK3-201ENST00000345005 EGR3Q06889 387 aa11.4□□□□□ -0.58
CLK3-201ENST00000345005 TMEM69Q5SWH9 247 aa11.4□□□□□ -0.58
CLK3-201ENST00000345005 SPINK14Q6IE38 97 aa11.4□□□□□ -0.58
CLK3-201ENST00000345005 SLC25A25Q6KCM7 469 aa11.4□□□□□ -0.58
CLK3-201ENST00000345005 TFAP2EQ6VUC0 442 aa11.4□□□□□ -0.58
CLK3-201ENST00000345005 DNM1P46Q6ZS02 220 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms