RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 NSG1A0A0A6YYJ2 146 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 ZNF816-ZNF321PA0A0X1KG74 233 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 TMEM210A6NLX4 147 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 ENPP1P22413 925 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 CCNOP22674 350 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 SUOXP51687 545 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 ZNF321PQ8N8H1 164 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 CAPNS2Q96L46 248 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 GLCEO94923 617 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 FCER1GP30273 86 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 SHC2P98077 582 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 OR10A7Q8NGE5 316 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 RAB7BQ96AH8 199 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 TAS2R4Q9NYW5 299 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 MTCH1Q9NZJ7 389 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 USP3Q9Y6I4 520 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 VEGFDO43915 354 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 TMPRSS11FQ6ZWK6 438 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 FZD1Q9UP38 647 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 F5H5K5 113 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 ATF1P18846 271 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 ZNF79Q15937 498 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 OR5K2Q8NHB8 316 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 DOK4Q8TEW6 326 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 GCGP01275 180 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 ICAM2P13598 275 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 IRS1P35568 1242 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 CNN3Q15417 329 aaKnown RBP12.46□□□□□ -0.41
TRIO-202ENST00000344204 MCHR2Q969V1 340 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 IL17CQ9P0M4 197 aa12.46□□□□□ -0.41
TRIO-202ENST00000344204 CLEC3AO75596 197 aa12.46□□□□□ -0.42
TRIO-202ENST00000344204 OR8U8P0C7N1 319 aa12.46□□□□□ -0.42
TRIO-202ENST00000344204 ZNF687Q8N1G0 1237 aa12.46□□□□□ -0.42
TRIO-202ENST00000344204 SIRT5Q9NXA8 310 aa12.46□□□□□ -0.42
TRIO-202ENST00000344204 MAML2Q8IZL2 1156 aaPredicted RBP12.46□□□□□ -0.42
TRIO-202ENST00000344204 CBARPQ8N350 705 aaPredicted RBP12.46□□□□□ -0.42
TRIO-202ENST00000344204 CSNK1EP49674 416 aaKnown RBP12.46□□□□□ -0.42
TRIO-202ENST00000344204 FOXN4Q96NZ1 517 aa12.46□□□□□ -0.42
TRIO-202ENST00000344204 SLC5A10A0PJK1 596 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 TMEM9BQ9NQ34 198 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 GUCA2BQ16661 112 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 ABHD6Q9BV23 337 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 TPGS2Q68CL5 300 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 TRMT61AQ96FX7 289 aaKnown RBP12.45□□□□□ -0.42
TRIO-202ENST00000344204 NMNAT3Q96T66 252 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 DNAJB11Q9UBS4 358 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 GEMIN2O14893 280 aaKnown RBP12.45□□□□□ -0.42
TRIO-202ENST00000344204 EOMESO95936 686 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 DLK1P80370 383 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 PNRC1Q12796 327 aaPredicted RBP12.45□□□□□ -0.42
TRIO-202ENST00000344204 SLC16A14Q7RTX9 510 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 MTFP1Q9UDX5 166 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 NPIPA5A0A0B4J1W7 369 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 KDM4EB2RXH2 506 aaPredicted RBP12.45□□□□□ -0.42
TRIO-202ENST00000344204 CSNK1A1P48729 337 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 LRP11Q86VZ4 500 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 SCGB2A1O75556 95 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 ABOP16442 354 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 OR5AR1Q8NGP9 310 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 MARCH1Q8TCQ1 289 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 CHRM2P08172 466 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 LIPNQ5VXI9 398 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 LDLRAD3Q86YD5 345 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 OR9A4Q8NGU2 314 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 NAA11Q9BSU3 229 aaPredicted RBP12.45□□□□□ -0.42
TRIO-202ENST00000344204 LCTP09848 1927 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 PRSS23O95084 383 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 PTGER1P34995 402 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 MTCP1P56278 107 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 OR8G2PQ6IF36 304 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 SYS1Q8N2H4 156 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 PFN4Q8NHR9 129 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 MACROD1Q9BQ69 325 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 LHX6Q9UPM6 363 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 ZNF85Q03923 595 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 GBX1Q14549 363 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 C12orf73Q69YU5 71 aa12.45□□□□□ -0.42
TRIO-202ENST00000344204 PEX12O00623 359 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 TYRP1P17643 537 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 CTSCP53634 463 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 TMEM128Q5BJH2 165 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRIO-202ENST00000344204 ZC3H12DA2A288 527 aaKnown RBP12.44□□□□□ -0.42
TRIO-202ENST00000344204 HIST1H1TP22492 207 aaPredicted RBP12.44□□□□□ -0.42
TRIO-202ENST00000344204 AVPR2P30518 371 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 STAC2Q6ZMT1 411 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 OIT3Q8WWZ8 545 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 GPR37O15354 613 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 FFAR4Q5NUL3 377 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 DMRTA1Q5VZB9 504 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 ACOT4Q8N9L9 421 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 DNAJC5Q9H3Z4 198 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 OR52R1Q8NGF1 315 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 TNFRSF13CQ96RJ3 184 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 NBASA2RRP1 2371 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 PLXNA2O75051 1894 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 FITM1A5D6W6 292 aa12.44□□□□□ -0.42
TRIO-202ENST00000344204 ZNF729A6NN14 1252 aaPredicted RBP12.44□□□□□ -0.42
TRIO-202ENST00000344204 ERVFRD-1P60508 538 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms