RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 FAM198BQ6UWH4 519 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 C17orf107Q6ZR85 190 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 RNF144BQ7Z419 303 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 ELMOD2Q8IZ81 293 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 OR2AJ1Q8NGZ0 328 aa13.23□□□□□ -0.29
VIPAS39-202ENST00000343765 PHF3Q92576 2039 aaKnown RBP13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 FXYD6-FXYD2A0A087WZ82 144 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 OR2M5A3KFT3 312 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 RER1O15258 196 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 ARPC5O15511 151 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 ZNF43P17038 809 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 P2RY4P51582 365 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 DLX5P56178 289 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 ESCO2Q56NI9 601 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 THEM4Q5T1C6 240 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 RTN4RL2Q86UN3 420 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 OR2AK2Q8NG84 335 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 FXYD6Q9H0Q3 95 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 ZNF736B4DX44 427 aaPredicted RBP13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 ETV2O00321 342 aaPredicted RBP13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 LDLRAD4O15165 306 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 RGS11O94810 467 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 CLDN6P56747 220 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 SLC25A53Q5H9E4 307 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 PMS2CLQ68D20 193 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 ZNF813Q6ZN06 617 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 CD163Q86VB7 1156 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 NKAIN3Q8N8D7 197 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 MR1Q95460 341 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 JSRP1Q96MG2 331 aaPredicted RBP13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 PILRBQ9UKJ0 227 aa13.22□□□□□ -0.29
VIPAS39-202ENST00000343765 PLSCR5A0PG75 271 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 OR2A4O95047 310 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 ABOP16442 354 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 SLC22A6Q4U2R8 563 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 C1orf100Q5SVJ3 147 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 MRPL14Q6P1L8 145 aaKnown RBP13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 ABHD12BQ7Z5M8 362 aaPredicted RBP13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 GVQW1Q8N7I0 195 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 OR1M1Q8NGA1 313 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 FAM71F1Q96KD3 344 aaPredicted RBP13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 SFXN2Q96NB2 322 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 OR2A7Q96R45 310 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 OPN4Q9UHM6 478 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 GPN3Q9UHW5 284 aaPredicted RBP13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 PTRH2Q9Y3E5 179 aaKnown RBP13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 CHCHD2Q9Y6H1 151 aaPredicted RBP13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 PRRC2CQ9Y520 2896 aaKnown RBP13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 IGHV3-15A0A0B4J1V0 119 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 TMEM82A0PJX8 343 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 SULT2B1O00204 365 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 QDPRP09417 244 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 CCL4P13236 92 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 NFYAP23511 347 aaPredicted RBP13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 PCOLCEQ15113 449 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 TOMM20Q15388 145 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 ZNF584Q8IVC4 421 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 BPIFB2Q8N4F0 458 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 NUDCD2Q8WVJ2 157 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 RADILQ96JH8 1075 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 PRO3102Q9H379 93 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 FBXO4Q9UKT5 387 aa13.21□□□□□ -0.29
VIPAS39-202ENST00000343765 ADAMTS9Q9P2N4 1935 aa13.21□□□□□ -0.3
VIPAS39-202ENST00000343765 EML6Q6ZMW3 1958 aa13.21□□□□□ -0.3
VIPAS39-202ENST00000343765 LOC390937A0A1W2PQ73 354 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 WIPF3A6NGB9 483 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF726A6NNF4 738 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 F5H5P2 479 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF20P17024 532 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 UNC119Q13432 240 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 SFRP5Q5T4F7 317 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 OR52W1Q6IF63 320 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 FJX1Q86VR8 437 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 TMEM229BQ8NBD8 167 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 NAT6Q93015 286 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 GNRHR2Q96P88 292 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 RHBDD3Q9Y3P4 386 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 MAB21L2Q9Y586 359 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 URB1O60287 2271 aaKnown RBP13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 IGLV3-32A0A0A0MS00 114 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 RPS10-NUDT3A0A1W2PQS6 291 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF878C9JN71 531 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 CLDN17P56750 224 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 ZNF121P58317 390 aaPredicted RBP13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 CDNFQ49AH0 187 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 TOR2AQ5JU69 321 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 AWAT2Q6E213 333 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 TRAPPC6BQ86SZ2 158 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 LYPD6Q86Y78 171 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 PAQR4Q8N4S7 273 aaPredicted RBP13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 TMEM265A0A087WTH1 108 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 LINC00862A6NCI5 91 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 METTL21EPA6NDL7 271 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 SULT1C2O00338 296 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 ITGB2P05107 769 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 GNB3P16520 340 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 RAB3AP20336 220 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 GPR85P60893 370 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 GABREP78334 506 aa13.2□□□□□ -0.3
VIPAS39-202ENST00000343765 COMMD7Q86VX2 200 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms