RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 PHF1O43189 567 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 EIF4E2O60573 245 aaKnown RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 CRYBA1P05813 215 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 SULT1A3P0DMM9 295 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 SULT1A4P0DMN0 295 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 CD53P19397 219 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 MFGE8Q08431 387 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 OR2W3Q7Z3T1 314 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 OR56B2PQ8NGI1 322 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 NUDCD2Q8WVJ2 157 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 SLAMF6Q96DU3 332 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 SDHCQ99643 169 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 RPP25Q9BUL9 199 aaKnown RBP7.32□□□□□ -1.24
UBE4B-202ENST00000343090 RSRP1Q9BUV0 290 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 GPR173Q9NS66 373 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 FBXO34Q9NWN3 711 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 SLCO1C1Q9NYB5 712 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 SLC17A4Q9Y2C5 497 aa7.32□□□□□ -1.24
UBE4B-202ENST00000343090 TRBV23-1A0A0A0MS06 115 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 IDSB3KWA1 339 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 BCL2L11O43521 198 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 CD3DP04234 171 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 GUSBP08236 651 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 FGF9P31371 208 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-202ENST00000343090 COL19A1Q14993 1142 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 C2orf76Q3KRA6 126 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 AADACL3Q5VUY0 350 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 ZNF813Q6ZN06 617 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 MDGA2Q7Z553 956 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 ZNF547Q8IVP9 402 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 GABRG1Q8N1C3 465 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 SLC43A2Q8N370 569 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 PRO1933Q9H354 126 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 GAR1Q9NY12 217 aaKnown RBP7.31□□□□□ -1.24
UBE4B-202ENST00000343090 LTBP4Q8N2S1 1624 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 SDCBPO00560 298 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-202ENST00000343090 OR2C1O95371 312 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 OR13C7P0DN81 318 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 GUCA2AQ02747 115 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 RTL6Q6ICC9 239 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 OR52W1Q6IF63 320 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 ZNF687Q8N1G0 1237 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 NKAIN3Q8N8D7 197 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 SMIM4Q8WVI0 70 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 AP1S3Q96PC3 154 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 ARHGDIGQ99819 225 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 BOKQ9UMX3 212 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-202ENST00000343090 PPIL1Q9Y3C6 166 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 A0A087WV62 115 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 TMEM200CA6NKL6 621 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 CEBPZOSA8MTT3 80 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 GPANK1O95872 356 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 QDPRP09417 244 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 EPXP11678 715 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 GNB3P16520 340 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 ALOX5APP20292 161 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 PPICP45877 212 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 GABRA2P47869 451 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 HIST2H3PS2Q5TEC6 136 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 PTCRAQ6ISU1 281 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-202ENST00000343090 HLA-CQ95604 372 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 PLA2G2FQ9BZM2 168 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 SPACA1Q9HBV2 294 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 GCM1Q9NP62 436 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 GHRLQ9UBU3 117 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 IGHV3-64DA0A0J9YX35 117 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 DCTN6O00399 190 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 CTSVO60911 334 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 IL2RGP31785 369 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 ERVK-16P61578 105 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 POLR2GP62487 172 aaKnown RBP eCLIP7.31□□□□□ -1.24
UBE4B-202ENST00000343090 YRDCQ86U90 279 aaKnown RBP7.31□□□□□ -1.24
UBE4B-202ENST00000343090 STT3BQ8TCJ2 826 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 C19orf43Q9BQ61 176 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 SLC25A21Q9BQT8 299 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-202ENST00000343090 SLC25A31Q9H0C2 315 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 CHST11Q9NPF2 352 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 CTSFQ9UBX1 484 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 TRAPPC2LQ9UL33 140 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 SLC5A6Q9Y289 635 aa7.31□□□□□ -1.24
UBE4B-202ENST00000343090 COL5A3P25940 1745 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-202ENST00000343090 IGHV3-15A0A0B4J1V0 119 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 PIGBOS1A0A0B4J2F0 54 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 BTBD17A6NE02 478 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 PYCARD-AS1I3L0S3 204 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 ABHD16AO95870 558 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 IGF2P01344 180 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 SFTA3P0C7M3 94 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 GABRA1P14867 456 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 SOHLH1Q5JUK2 328 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 DCAF12Q5T6F0 453 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 LILRA6Q6PI73 481 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 VHLLQ6RSH7 139 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 Q6ZS52 159 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 SYS1Q8N2H4 156 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 OR5L1Q8NGL2 311 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 FBLIM1Q8WUP2 373 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 ABHD1Q96SE0 405 aa7.3□□□□□ -1.24
UBE4B-202ENST00000343090 MRPS2Q9Y399 296 aaKnown RBP7.3□□□□□ -1.24
UBE4B-202ENST00000343090 UBR3Q6ZT12 1888 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms