RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 STARD10Q9Y365 291 aa8.65□□□□□ -1.02
HOXA1-201ENST00000343060 FLVCR1Q9Y5Y0 555 aa8.65□□□□□ -1.02
HOXA1-201ENST00000343060 LOC100509620A0A075B734 347 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 IGLV1-36A0A0B4J1U3 117 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 ZNF264O43296 627 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 GAPDHP04406 335 aaKnown RBP8.64□□□□□ -1.03
HOXA1-201ENST00000343060 PET100P0DJ07 73 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 LSSP48449 732 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 SSTP61278 116 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 SP3Q02447 781 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 UNC119Q13432 240 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 EIF2B1Q14232 305 aaKnown RBP8.64□□□□□ -1.03
HOXA1-201ENST00000343060 CST6Q15828 149 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 AWAT1Q58HT5 328 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 KCTD18Q6PI47 426 aaPredicted RBP8.64□□□□□ -1.03
HOXA1-201ENST00000343060 SLC35D2Q76EJ3 337 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 MDGA2Q7Z553 956 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 PEG10Q86TG7 708 aaKnown RBP8.64□□□□□ -1.03
HOXA1-201ENST00000343060 C1QL4Q86Z23 238 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 JAGN1Q8N5M9 183 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 COMMD1Q8N668 190 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 ZNF519Q8TB69 540 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 MARCH1Q8TCQ1 289 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 ROBO4Q8WZ75 1007 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 SCRT1Q9BWW7 348 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 FGF22Q9HCT0 170 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 CUTCQ9NTM9 273 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 VSX1Q9NZR4 365 aaPredicted RBP8.64□□□□□ -1.03
HOXA1-201ENST00000343060 PCOLCE2Q9UKZ9 415 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 GPR132Q9UNW8 380 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 LRP12Q9Y561 859 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 R4GMQ9 66 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 TRBV23-1A0A0A0MS06 115 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 LOC107986453A0A1B0GWG9 222 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 DCDC2BA2VCK2 349 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 A6NLC8 198 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 OIP5O43482 229 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 ZNF217O75362 1048 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 NDUFS6O75380 124 aaKnown RBP8.64□□□□□ -1.03
HOXA1-201ENST00000343060 BPNT1O95861 308 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 TIMP1P01033 207 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 ST6GAL1P15907 406 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 ZNF14P17017 642 aaPredicted RBP8.64□□□□□ -1.03
HOXA1-201ENST00000343060 NME2P22392 152 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 HTR5AP47898 357 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 DNASE1L1P49184 302 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 IGLV3-21P80748 117 aaPredicted RBP8.64□□□□□ -1.03
HOXA1-201ENST00000343060 SPOCK1Q08629 439 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 RPL7L1Q6DKI1 246 aaKnown RBP8.64□□□□□ -1.03
HOXA1-201ENST00000343060 FAM3CQ92520 227 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 RERGQ96A58 199 aaPredicted RBP8.64□□□□□ -1.03
HOXA1-201ENST00000343060 CMBLQ96DG6 245 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 FBXO17Q96EF6 278 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 KTI12Q96EK9 354 aaPredicted RBP8.64□□□□□ -1.03
HOXA1-201ENST00000343060 AKR1E2Q96JD6 320 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 C2orf50Q96LR7 162 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 ZNF285Q96NJ3 590 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 TOX2Q96NM4 488 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 APOOQ9BUR5 198 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 S1PR5Q9H228 398 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 SLC26A1Q9H2B4 701 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 C5orf66Q9H5L9 145 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 TAF9BQ9HBM6 251 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 RPS10P5Q9NQ39 176 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 GTF2A1LQ9UNN4 478 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 CPAMD8Q8IZJ3 1885 aa8.64□□□□□ -1.03
HOXA1-201ENST00000343060 TBC1D3DA0A087WVF3 549 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 C7orf77A4D0Y5 90 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 HIDE1A8MVS5 230 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 TBC1D3LB9A6J9 549 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 TGFBR3LH3BV60 316 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 HRKO00198 91 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 BGLAPP02818 100 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 HOXC4P09017 264 aaPredicted RBP8.63□□□□□ -1.03
HOXA1-201ENST00000343060 TBC1D3HP0C7X1 549 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 LAP3P28838 519 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 HSD11B1P28845 292 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 CD226Q15762 336 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 KIF26BQ2KJY2 2108 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 ACTBL2Q562R1 376 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 C2orf27AQ580R0 203 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 NSUN5P2Q63ZY6 315 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 TBC1D3CQ6IPX1 549 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 CLEC18BQ6UXF7 455 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 TBC1D3Q8IZP1 549 aaPredicted RBP8.63□□□□□ -1.03
HOXA1-201ENST00000343060 ARRDC1Q8N5I2 433 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 OR13C3Q8NGS6 347 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 OR52N5Q8NH56 324 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 TERB2Q8NHR7 220 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 MAP3K3Q99759 626 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 LMAN1LQ9HAT1 526 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 G6PC2Q9NQR9 355 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 TREM2Q9NZC2 230 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 PTPRSQ13332 1948 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 A0A1W2PPH5 198 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 PRSS38A1L453 326 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 PRSS37A4D1T9 235 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 A6NCN8 305 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 TXNL1O43396 289 aa8.63□□□□□ -1.03
HOXA1-201ENST00000343060 ADAP1O75689 374 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms