RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 RAB32Q13637 225 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 PLA2G12AQ9BZM1 189 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 SLC17A4Q9Y2C5 497 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 C19orf57Q0VDD7 668 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 SGK494Q96LW2 274 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 SDR39U1Q9NRG7 319 aaPredicted RBP16.18■□□□□ 0.18
SMAD4-201ENST00000342988 SIRT3Q9NTG7 399 aaPredicted RBP16.18■□□□□ 0.18
SMAD4-201ENST00000342988 CEBPDP49716 269 aaPredicted RBP16.18■□□□□ 0.18
SMAD4-201ENST00000342988 C14orf80Q86SX3 495 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 OR1L4Q8NGR5 311 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 A0A0U1RQF3 1178 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 GYPAP02724 150 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 CD82P27701 267 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 MLF1P58340 268 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 OR1C1Q15619 314 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 TMEM268Q5VZI3 342 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 OR4S1Q8NGB4 309 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 OR5R1Q8NH85 324 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 SLC39A13Q96H72 371 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 SNRPBP14678 240 aaKnown RBP16.18■□□□□ 0.18
SMAD4-201ENST00000342988 TAZQ16635 292 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 ANGPTL5Q86XS5 388 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 SLC38A9Q8NBW4 561 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 RSG1Q9BU20 258 aa16.18■□□□□ 0.18
SMAD4-201ENST00000342988 UBE2L5PA0A1B0GUS4 154 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 RGS13O14921 159 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 Q56UQ5 140 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 LRRC10Q5BKY1 277 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 APIPQ96GX9 242 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 FZD8Q9H461 694 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 RPL12P30050 165 aaKnown RBP16.17■□□□□ 0.18
SMAD4-201ENST00000342988 CAMKMTQ7Z624 323 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 ZNF764Q96H86 408 aaPredicted RBP16.17■□□□□ 0.18
SMAD4-201ENST00000342988 TWSG1Q9GZX9 223 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 A0A0G2JLL6 359 aaPredicted RBP16.17■□□□□ 0.18
SMAD4-201ENST00000342988 UBE2L6O14933 153 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 F13BP05160 661 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 RPLP1P05386 114 aaKnown RBP16.17■□□□□ 0.18
SMAD4-201ENST00000342988 PRRT2Q7Z6L0 340 aaPredicted RBP16.17■□□□□ 0.18
SMAD4-201ENST00000342988 BCL7CQ8WUZ0 217 aaPredicted RBP16.17■□□□□ 0.18
SMAD4-201ENST00000342988 LAMB1P07942 1786 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 LIMS3P0CW19 117 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 LIMS4P0CW20 117 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 CPEB2Q7Z5Q1 589 aaKnown RBP16.17■□□□□ 0.18
SMAD4-201ENST00000342988 OR2I1PQ8NGU4 316 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 CMBLQ96DG6 245 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.17■□□□□ 0.18
SMAD4-201ENST00000342988 SLCO1B1Q9Y6L6 691 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 OR52A4PA6NMU1 304 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 I6L893 689 aaPredicted RBP16.17■□□□□ 0.18
SMAD4-201ENST00000342988 SEMA3BQ13214 749 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 NAA60Q9H7X0 242 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 UBTD1Q9HAC8 227 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 C5AR2Q9P296 337 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 ACP1P24666 158 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 C15orf52Q6ZUT6 534 aaKnown RBP16.17■□□□□ 0.18
SMAD4-201ENST00000342988 GSX2Q9BZM3 304 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 FZD6O60353 706 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 CCR9P51686 369 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 HNRNPA1L2Q32P51 320 aaKnown RBP16.17■□□□□ 0.18
SMAD4-201ENST00000342988 OR2B11Q5JQS5 317 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 TAAR9Q96RI9 348 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 TMEM191AQ9H0A3 160 aa16.17■□□□□ 0.18
SMAD4-201ENST00000342988 ACOD1A6NK06 481 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 TSPAN13O95857 204 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 DNAL4O96015 105 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 CIRBPQ14011 172 aaKnown RBP16.16■□□□□ 0.18
SMAD4-201ENST00000342988 HYAL4Q2M3T9 481 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 PARP12Q9H0J9 701 aaKnown RBP16.16■□□□□ 0.18
SMAD4-201ENST00000342988 FCN1O00602 326 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 CD99P14209 185 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 FCN2Q15485 313 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 SLCO4A1Q96BD0 722 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 FOXN4Q96NZ1 517 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 OR5V1Q9UGF6 321 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 BPIFA4PQ86YQ2 179 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 TXLNGYQ9BZA5 131 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 C1orf61Q13536 156 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 CTU2Q2VPK5 515 aaKnown RBP16.16■□□□□ 0.18
SMAD4-201ENST00000342988 MAML2Q8IZL2 1156 aaPredicted RBP16.16■□□□□ 0.18
SMAD4-201ENST00000342988 LANCL2Q9NS86 450 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 TRGV10A0A0A0MS01 117 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 A0A1W2PN81 502 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 CHRNA7P36544 502 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 PGGT1BP53609 377 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 PLA1AQ53H76 456 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 FUBP1Q96AE4 644 aaKnown RBP16.16■□□□□ 0.18
SMAD4-201ENST00000342988 NXF2Q9GZY0 626 aaKnown RBP16.16■□□□□ 0.18
SMAD4-201ENST00000342988 SLC7A10Q9NS82 523 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 SLC45A1Q9Y2W3 748 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 CYR61O00622 381 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 KLRB1Q12918 225 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 SLC5A12Q1EHB4 618 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 C3orf30Q96M34 536 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 IL25Q9H293 177 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 FBXL17Q9UF56 701 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 PRRG2O14669 202 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 SYNGR2O43760 224 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 WDR1O75083 606 aa16.16■□□□□ 0.18
SMAD4-201ENST00000342988 VNN1O95497 513 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms