RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 NR2C1P13056 603 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 IRF2P14316 349 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 TNFRSF1BP20333 461 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 FPR3P25089 353 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 GUCA1AP43080 201 aaPredicted RBP13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 WDR4P57081 412 aaKnown RBP13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 CTXN1P60606 82 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 SCRN3Q0VDG4 424 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 SELPLGQ14242 412 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 BTN2A1Q7KYR7 527 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 GALNT4Q8N4A0 578 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 KLHDC1Q8N7A1 406 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 BOLLQ8N9W6 283 aaKnown RBP13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 PCYOX1LQ8NBM8 494 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 COG8Q96MW5 612 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 TMEM109Q9BVC6 243 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 KCNK9Q9NPC2 374 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 TMEM100Q9NV29 134 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 THAP1Q9NVV9 213 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 HIF3AQ9Y2N7 669 aa13.43□□□□□ -0.26
NECTIN1-202ENST00000340882 ELOVL7A1L3X0 281 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 ANKRD61A6NGH8 418 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 SHOX2O60902 331 aaPredicted RBP13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 FBP1P09467 338 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 POU4F2Q12837 409 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 FHL1Q13642 323 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 NSUN5P1Q3KNT7 163 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 KRT71Q3SY84 523 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 DLEU7Q6UYE1 221 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 PNKDQ8N490 385 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 C11orf65Q8NCR3 313 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 OR1F12Q8NHA8 337 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 LRRC8CQ8TDW0 803 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 TMEM239Q8WW34 195 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 SPDL1Q96EA4 605 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 ECSITQ9BQ95 431 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 MMP28Q9H239 520 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 DNAJB11Q9UBS4 358 aa13.42□□□□□ -0.26
NECTIN1-202ENST00000340882 A0A1B0GW55 424 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 MEGF11A6BM72 1044 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 EVPLLA8MZ36 301 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 RNASEK-C17orf49H0YIS7 233 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 LGALS8O00214 317 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 GYPAP02724 150 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 DUX4L2P0CJ85 424 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 DUX4L3P0CJ86 424 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 DUX4L4P0CJ87 422 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 DUX4L5P0CJ88 424 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 DUX4L6P0CJ89 424 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 DUX4L7P0CJ90 424 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 RBM34P42696 430 aaKnown RBP13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 VSNL1P62760 191 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 ELF3P78545 371 aaPredicted RBP13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 KLRD1Q13241 179 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 PIN1Q13526 163 aaPredicted RBP13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 INTS11Q5TA45 600 aaKnown RBP13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 DUX4L9Q6RFH8 374 aaPredicted RBP13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 ANKRD42Q8N9B4 389 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 OR11L1Q8NGX0 322 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 FNDC8Q8TC99 324 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 RASD2Q96D21 266 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 SIRT7Q9NRC8 400 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 CCDC167Q9P0B6 97 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 DUX4Q9UBX2 424 aa13.41□□□□□ -0.26
NECTIN1-202ENST00000340882 DYNC2H1Q8NCM8 4307 aaKnown RBP13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 BTBD17A6NE02 478 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 DVL1O14640 695 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 RER1O15258 196 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 RGS16O15492 202 aaPredicted RBP13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 XPNPEP2O43895 674 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 IGF2P01344 180 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 CD200P41217 278 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 MRPL19P49406 292 aaKnown RBP13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 RSPO1Q2MKA7 263 aaPredicted RBP13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 CDONQ4KMG0 1287 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 MICU2Q8IYU8 434 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 WACQ9BTA9 647 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 CNTD2Q9H8S5 307 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 RNF7Q9UBF6 113 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 RIMS3Q9UJD0 308 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 RPUSD1Q9UJJ7 312 aaKnown RBP13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 CORO2BQ9UQ03 480 aa13.4□□□□□ -0.26
NECTIN1-202ENST00000340882 TRAV27A0A087WT01 109 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 IMPA2O14732 288 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 CTLA4P16410 223 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 KIR2DS4P43632 304 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 MTPNP58546 118 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 AQP6Q13520 282 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 OR8B8Q15620 311 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 CYP51A1Q16850 503 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 TNFAIP8L3Q5GJ75 292 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 CALHM3Q86XJ0 350 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 FAM90A1Q86YD7 464 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 CELF2-AS1Q8N7Q2 184 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 OR5L1Q8NGL2 311 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 AENQ8WTP8 325 aaKnown RBP13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 ERGIC1Q969X5 290 aa13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 APOBEC3DQ96AK3 386 aaPredicted RBP13.39□□□□□ -0.27
NECTIN1-202ENST00000340882 WWC2-AS2Q96NR7 200 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms