RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 IGFBP5P24593 272 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 BLVRAP53004 296 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 CDK5R2Q13319 367 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 TRIP10Q15642 601 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 TSTQ16762 297 aaKnown RBP11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 SLC35F1Q5T1Q4 408 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 SLC18B1Q6NT16 456 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 FBXW12Q6X9E4 464 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 USP51Q70EK9 711 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 ADGRG5Q8IZF4 528 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 PLPP7Q8NBV4 271 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 PROKR2Q8NFJ6 384 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 OR10G2Q8NGC3 310 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 NRG4Q8WWG1 115 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 RAB1CQ92928 201 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 HAVCR1Q96D42 359 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 CLPTM1LQ96KA5 538 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 NR1H4Q96RI1 486 aaPredicted RBP11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 ATF6BQ99941 703 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 CHID1Q9BWS9 393 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 PURGQ9UJV8 347 aaKnown RBP11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 U3KQV3 271 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 CUBNO60494 3623 aa11.34□□□□□ -0.59
SIRPB3P-201ENST00000340424 SURF4O15260 269 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 CST1P01037 141 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 ANPEPP15144 967 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 TNFRSF1AP19438 455 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 IL2RGP31785 369 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 GGT2P36268 569 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 SLC25A1P53007 311 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 DVL1P1P54792 670 aaPredicted RBP11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 FLOT2Q14254 428 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 MEP1BQ16820 701 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 KRTAP27-1Q3LI81 207 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 TMEM255AQ5JRV8 349 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 FAM120AOSQ5T036 256 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 PEG10Q86TG7 708 aaKnown RBP11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 CLDND2Q8NHS1 167 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 RAB39BQ96DA2 213 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 DDOQ99489 341 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 TSSK6Q9BXA6 273 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 PLA2G12AQ9BZM1 189 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 PGPEP1Q9NXJ5 209 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 STARD10Q9Y365 291 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 MALRD1Q5VYJ5 2156 aa11.33□□□□□ -0.6
SIRPB3P-201ENST00000340424 RIIAD1A6NNX1 92 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 KIAA1324LA8MWY0 1029 aaPredicted RBP11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 GNGT2O14610 69 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 CDC14BO60729 498 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 GPANK1O95872 356 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 SELEP16581 610 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 ZNF3P17036 446 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 SRD5A1P18405 259 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 TNFAIP6P98066 277 aaPredicted RBP11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 CCNIQ14094 377 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 SLC27A4Q6P1M0 643 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 CORO6Q6QEF8 472 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 COLCA1Q6ZS62 124 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 GLCCI1Q86VQ1 547 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 SLC37A3Q8NCC5 494 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 OR8D4Q8NGM9 314 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 TEX47Q8TBZ9 253 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 GIPC3Q8TF64 312 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 SLC7A6Q92536 515 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 GTF3AQ92664 365 aaKnown RBP11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 SPTSSAQ969W0 71 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 CMBLQ96DG6 245 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 ZNF184Q99676 751 aaPredicted RBP11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 PITX2Q99697 317 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 SOX7Q9BT81 388 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 RBM4Q9BWF3 364 aaKnown RBP11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 C1QTNF5Q9BXJ0 243 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 VCXQ9H320 206 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 CMC2Q9NRP2 79 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 VNN3Q9NY84 501 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 IL19Q9UHD0 177 aa11.32□□□□□ -0.6
SIRPB3P-201ENST00000340424 IFNL4K9M1U5 179 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 DBHP09172 617 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 FMO3P31513 532 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 TPTEP56180 551 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 PPP1R8Q12972 351 aaKnown RBP11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 CR1LQ2VPA4 569 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 ZNF362Q5T0B9 420 aaPredicted RBP11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 OTPQ5XKR4 325 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 CFAP77Q6ZQR2 320 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 TEX29Q8N6K0 151 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 CYB561A3Q8NBI2 242 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 OR51F2Q8NH61 342 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 CANT1Q8WVQ1 401 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 CCL17Q92583 94 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 ZNF582Q96NG8 517 aaPredicted RBP11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 FEVQ99581 238 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 HCAR1Q9BXC0 346 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 NMNAT2Q9BZQ4 307 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 FN3KQ9H479 309 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 POFUT1Q9H488 388 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 ZNF665Q9H7R5 613 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 ZNF556Q9HAH1 456 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 MSL2Q9HCI7 577 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms