RNA–Protein interactions for RNA: ENST00000339901.8

SECISBP2-201, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SECISBP2, Length 3,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-201ENST00000339901 MSX1P28360 303 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 HOXD11P31277 338 aaPredicted RBP11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 FOXF1Q12946 379 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 OR10K2Q6IF99 312 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 FJX1Q86VR8 437 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 PDZD9Q8IXQ8 264 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 DTWD2Q8NBA8 298 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 OR1M1Q8NGA1 313 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 FAM46BQ96A09 425 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 FGGYQ96C11 551 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 PBOV1Q9GZY1 135 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 DUSP15Q9H1R2 295 aaPredicted RBP11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 TNFSF18Q9UNG2 199 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 EFNA2O43921 213 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 TBPP20226 339 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 NUP62P37198 522 aaPredicted RBP11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 P2RY4P51582 365 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 CLDN6P56747 220 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 THEM4Q5T1C6 240 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 LYG2Q86SG7 212 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 MRGPRX4Q96LA9 322 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 MOB1AQ9H8S9 216 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 SERINC1Q9NRX5 453 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 MED29Q9NX70 200 aa11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 GPN3Q9UHW5 284 aaPredicted RBP11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 RPH3AQ9Y2J0 694 aaPredicted RBP11.96□□□□□ -0.49
SECISBP2-201ENST00000339901 PHF3Q92576 2039 aaKnown RBP11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 CACNA1CQ13936 2221 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 IGHV3-20A0A0C4DH32 117 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 OR5H14A6NHG9 310 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 VSTM2BA6NLU5 285 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 TMEM14DPA8MWL7 114 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 OR2F2O95006 317 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 ONECUT2O95948 504 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 ZNF28P17035 718 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 LAP3P28838 519 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 CD96P40200 585 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 OR2F1Q13607 317 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 TUSC1Q2TAM9 212 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 C16orf47Q6ZP98 133 aaPredicted RBP11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 ZNF546Q86UE3 836 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 BEST3Q8N1M1 668 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 OR52N4Q8NGI2 321 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 DNASE2BQ8WZ79 361 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 ADAT3Q96EY9 351 aaPredicted RBP11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 TTYH1Q9H313 450 aaPredicted RBP11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 GLS2Q9UI32 602 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 ZNF230Q9UIE0 474 aaPredicted RBP11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 SLC5A6Q9Y289 635 aa11.96□□□□□ -0.5
SECISBP2-201ENST00000339901 FCER2P06734 321 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 VSIG8P0DPA2 414 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 CD34P28906 385 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 PTGDSP41222 190 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 ZNF239Q16600 458 aaKnown RBP11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 C11orf87Q6NUJ2 197 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 JMJD6Q6NYC1 403 aaPredicted RBP11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 TMED4Q7Z7H5 227 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 ACBD4Q8NC06 268 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 MITD1Q8WV92 249 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 DNTTIP1Q9H147 329 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 HRH3Q9Y5N1 445 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 PLPPR5Q32ZL2 321 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 TMPRSS9Q7Z410 1059 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 TRAPPC6BQ86SZ2 158 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 OR5D14Q8NGL3 314 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 POC1BQ8TC44 478 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 ZBTB8AQ96BR9 441 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 WDR77Q9BQA1 342 aaPredicted RBP11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 C1QTNF6Q9BXI9 259 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 ZNF576Q9H609 170 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 ZMAT3Q9HA38 289 aaKnown RBP11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 SEC16AO15027 2179 aa11.95□□□□□ -0.5
SECISBP2-201ENST00000339901 C2orf72A6NCS6 295 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 MBTPS2O43462 519 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 RLN2P04090 185 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 NAT1P18440 290 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 BIDP55957 195 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 SQSTM1Q13501 440 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 CDNFQ49AH0 187 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 RNASE10Q5GAN6 216 aaKnown RBP11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 OR2W3Q7Z3T1 314 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 OR4S1Q8NGB4 309 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 ST8SIA2Q92186 375 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 PHF7Q9BWX1 381 aaPredicted RBP11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 RASL12Q9NYN1 266 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 D6RAR5 112 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 PGA4P0DJD7 388 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 PGA3P0DJD8 388 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 KCNMB1Q16558 191 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 KLHL24Q6TFL4 600 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 TFAP2EQ6VUC0 442 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 LHFPL5Q8TAF8 219 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 PHYHIPLQ96FC7 376 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 B3GNT4Q9C0J1 378 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 BARX1Q9HBU1 254 aaPredicted RBP11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 CENPMQ9NSP4 180 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 FBXO4Q9UKT5 387 aa11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 FARSAQ9Y285 508 aaKnown RBP11.94□□□□□ -0.5
SECISBP2-201ENST00000339901 C9orf170A2RU37 121 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms