RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CCR6P51684 374 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 UBE2NLQ5JXB2 153 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 BCL2L15Q5TBC7 163 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 C9orf135Q5VTT2 229 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 RTN4RL2Q86UN3 420 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 SIAH3Q8IW03 269 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 OR1J2Q8NGS2 313 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 OR2AJ1Q8NGZ0 328 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 OR52I2Q8NH67 350 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 ZMAT3Q9HA38 289 aaKnown RBP6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 RBFOX1Q9NWB1 397 aaKnown RBP6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 HHLA2Q9UM44 414 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 FOXJ3Q9UPW0 622 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 KIAA1549Q9HCM3 1950 aa6.52□□□□□ -1.37
SRFBP1-201ENST00000339397 MEIS3P1A6NDR6 274 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 PRR33A8MZF0 331 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 PDCD5O14737 125 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 DHHO43323 396 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 UBL3O95164 117 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 B4GALT1P15291 398 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 IGFBP3P17936 291 aaPredicted RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 HSD11B1P28845 292 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 PLA2G5P39877 138 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 INPP1P49441 399 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 EIF2B2P49770 351 aaKnown RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 LHX2P50458 406 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 CCL11P51671 97 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 MRPL28Q13084 256 aaKnown RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 TAF13Q15543 124 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 PYHIN1Q6K0P9 492 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 FAM57BQ71RH2 274 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 LUZP2Q86TE4 346 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 ELMOD2Q8IZ81 293 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 OR8B12Q8NGG6 310 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 OR52N4Q8NGI2 321 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 OR4D6Q8NGJ1 314 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 OR2V1Q8NHB1 315 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 FNDC9Q8TBE3 224 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 ENKURQ8TC29 256 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 UBASH3BQ8TF42 649 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 CHAC2Q8WUX2 184 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 TMEM54Q969K7 222 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 PPP1R14BQ96C90 147 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 FAM71F1Q96KD3 344 aaPredicted RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 FAM173AQ9BQD7 235 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 NAA11Q9BSU3 229 aaPredicted RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 ULBP2Q9BZM5 246 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 SLITRK2Q9H156 845 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 DEFB127Q9H1M4 99 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 SPTBN4Q9H254 2564 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 TRAV6A0A075B6T7 132 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 SYT7O43581 403 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 TLX3O43711 291 aaPredicted RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 MT-ND4P03905 459 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 GNALP38405 381 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 MMP15P51511 669 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 CLDN18P56856 261 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 SFRP5Q5T4F7 317 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 AGAP6Q5VW22 663 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 ABHD12BQ7Z5M8 362 aaPredicted RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 COMMD2Q86X83 199 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 JAGN1Q8N5M9 183 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 ITFG2Q969R8 447 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 SLC25A28Q96A46 364 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 FAM3DQ96BQ1 224 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 AGAP4Q96P64 663 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 NELFAQ9H3P2 528 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF552Q9H707 407 aaPredicted RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 GPR84Q9NQS5 396 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF275Q9NSD4 429 aaPredicted RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 STEAP1Q9UHE8 339 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 NUFIP1Q9UHK0 495 aaKnown RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF878C9JN71 531 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 GMDSO60547 372 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 VAMP5O95183 116 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 ISG15P05161 165 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 SP1P08047 785 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 GIFP27352 417 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 CX3CR1P49238 355 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 MEOX1P50221 254 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 HGFACQ04756 655 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 POU4F3Q15319 338 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 TATDN3Q17R31 274 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 MOGAT2Q3SYC2 334 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 CCDC92Q53HC0 331 aaPredicted RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 RSBN1Q5VWQ0 802 aaPredicted RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 FAM166AQ6J272 317 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 JMJD6Q6NYC1 403 aaPredicted RBP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 DEGS2Q6QHC5 323 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 KLHL24Q6TFL4 600 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 C20orf196Q8IYI0 205 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF283Q8N7M2 679 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 FDCSPQ8NFU4 85 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 FAM46BQ96A09 425 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 RNF170Q96K19 258 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 LYZL4Q96KX0 146 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 OR2B2Q9GZK3 357 aa6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.51□□□□□ -1.37
SRFBP1-201ENST00000339397 RNF121Q9H920 327 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms