RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 FKBP9P1Q75LS8 142 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 NLRC3Q7RTR2 1065 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 RNF113BQ8IZP6 322 aaKnown RBP13.07□□□□□ -0.32
LINC01116-202ENST00000339037 OR8G5Q8NG78 346 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 OR5L1Q8NGL2 311 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 OR13G1Q8NGZ3 307 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 OR1F12Q8NHA8 337 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 FAM162AQ96A26 154 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 RASD2Q96D21 266 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 NEIL1Q96FI4 390 aaPredicted RBP13.07□□□□□ -0.32
LINC01116-202ENST00000339037 Q96M85 177 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 ZNF582Q96NG8 517 aaPredicted RBP13.07□□□□□ -0.32
LINC01116-202ENST00000339037 KCTD14Q9BQ13 255 aaPredicted RBP13.07□□□□□ -0.32
LINC01116-202ENST00000339037 NDEL1Q9GZM8 345 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 RERGLQ9H628 205 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 TMEM165Q9HC07 324 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 PTTG3PQ9NZH4 202 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 ABCD2Q9UBJ2 740 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 MIOXQ9UGB7 285 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 ATPIF1Q9UII2 106 aa13.07□□□□□ -0.32
LINC01116-202ENST00000339037 IGHV3-64DA0A0J9YX35 117 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 MDFIC2A0A1B0GVS7 189 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 HOXA3O43365 443 aaPredicted RBP13.06□□□□□ -0.32
LINC01116-202ENST00000339037 DBHP09172 617 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 LSM6P62312 80 aaKnown RBP13.06□□□□□ -0.32
LINC01116-202ENST00000339037 OTPQ5XKR4 325 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 TMPRSS11FQ6ZWK6 438 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 FAM122BQ7Z309 247 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 GLB1L2Q8IW92 636 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 OR8B3Q8NGG8 313 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 SLC7A13Q8TCU3 470 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 DACT3Q96B18 629 aaPredicted RBP13.06□□□□□ -0.32
LINC01116-202ENST00000339037 FAM46AQ96IP4 442 aaKnown RBP13.06□□□□□ -0.32
LINC01116-202ENST00000339037 OR8B2Q96RD0 313 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 TMEM246Q9BRR3 403 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 MYLK2Q9H1R3 596 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 SYT4Q9H2B2 425 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 NMNAT1Q9HAN9 279 aaPredicted RBP13.06□□□□□ -0.32
LINC01116-202ENST00000339037 POLR1DQ9Y2S0 133 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 MMP24Q9Y5R2 645 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 ENPP4Q9Y6X5 453 aa13.06□□□□□ -0.32
LINC01116-202ENST00000339037 KIR2DS1A0A191URI9 304 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 RER1O15258 196 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 SLC16A7O60669 478 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 PITPNBP48739 271 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 PSME3P61289 254 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 KRR1Q13601 381 aaKnown RBP13.05□□□□□ -0.32
LINC01116-202ENST00000339037 ZNF404Q494X3 552 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 ZBED5Q49AG3 693 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 CCDC92Q53HC0 331 aaPredicted RBP13.05□□□□□ -0.32
LINC01116-202ENST00000339037 BRD3OSQ6XYD6 125 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 MOGAT3Q86VF5 341 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 C1orf87Q8N0U7 546 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 FAM86B1Q8N7N1 296 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 BHLHE23Q8NDY6 225 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 OR10S1Q8NGN2 331 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 APOBEC3DQ96AK3 386 aaPredicted RBP13.05□□□□□ -0.32
LINC01116-202ENST00000339037 ELAC2Q9BQ52 826 aaKnown RBP13.05□□□□□ -0.32
LINC01116-202ENST00000339037 CLN8Q9UBY8 286 aa13.05□□□□□ -0.32
LINC01116-202ENST00000339037 COA3Q9Y2R0 106 aaPredicted RBP13.05□□□□□ -0.32
LINC01116-202ENST00000339037 A0A1B0GUS0 222 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 FAM181BA6NEQ2 426 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 F5H5P2 479 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 H0YL77 283 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 MLNRO43193 412 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 KHDRBS3O75525 346 aaKnown RBP13.04□□□□□ -0.32
LINC01116-202ENST00000339037 FSTL3O95633 263 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 KNG1P01042 644 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 SDHAP31040 664 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 ZNF181Q2M3W8 571 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 DEFB112Q30KQ8 113 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 ZNF362Q5T0B9 420 aaPredicted RBP13.04□□□□□ -0.32
LINC01116-202ENST00000339037 C17orf107Q6ZR85 190 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 RRM2BQ7LG56 351 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 ADCK1Q86TW2 530 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 CYP4Z1Q86W10 505 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 RNF148Q8N7C7 305 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 WFDC12Q8WWY7 111 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 SLC30A2Q9BRI3 323 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 NUDT16L1Q9BRJ7 211 aaKnown RBP13.04□□□□□ -0.32
LINC01116-202ENST00000339037 ANKRD19PQ9H560 264 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 TMEM5Q9Y2B1 443 aa13.04□□□□□ -0.32
LINC01116-202ENST00000339037 SRRM5B3KS81 715 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 NDUFAB1O14561 156 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 PHYHO14832 338 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 DIRAS1O95057 198 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 H1F0P07305 194 aaKnown RBP13.03□□□□□ -0.32
LINC01116-202ENST00000339037 IRF2P14316 349 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 RAG2P55895 527 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 FGF12P61328 243 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 SEC23BQ15437 767 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 FGD3Q5JSP0 725 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 FAM201AQ5SY85 155 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 GPR157Q5UAW9 335 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 GPR139Q6DWJ6 353 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 GLYATQ6IB77 296 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 FITM2Q8N6M3 262 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 OR4F5Q8NH21 305 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 CMTM5Q96DZ9 223 aa13.03□□□□□ -0.32
LINC01116-202ENST00000339037 C7orf34Q96L11 122 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms