RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 FAM206AQ9NX38 181 aa18.68■□□□□ 0.58
TPM1-204ENST00000334895 NPAP1Q9NZP6 1156 aa18.68■□□□□ 0.58
TPM1-204ENST00000334895 CRNNQ9UBG3 495 aaPredicted RBP18.68■□□□□ 0.58
TPM1-204ENST00000334895 COL12A1Q99715 3063 aa18.68■□□□□ 0.58
TPM1-204ENST00000334895 F5H5K5 113 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 CLDN14O95500 239 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 THBDP07204 575 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 CCL2P13500 99 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 STOMP27105 288 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 HSD11B1P28845 292 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 LIPAP38571 399 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 RPL5P46777 297 aaKnown RBP18.67■□□□□ 0.58
TPM1-204ENST00000334895 GBX2P52951 348 aaPredicted RBP18.67■□□□□ 0.58
TPM1-204ENST00000334895 PSMA6P60900 246 aaKnown RBP18.67■□□□□ 0.58
TPM1-204ENST00000334895 BDH1Q02338 343 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 PRSS45Q7RTY3 260 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 NAA40Q86UY6 237 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 PRSS35Q8N3Z0 413 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 RPS4Y2Q8TD47 263 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 POM121L2Q96KW2 1035 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 USB1Q9BQ65 265 aaKnown RBP18.67■□□□□ 0.58
TPM1-204ENST00000334895 NIPAL2Q9H841 368 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 ISYNA1Q9NPH2 558 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 R4GMQ9 66 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 ADGRG4Q8IZF6 3080 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 PNMA8CA0A1B0GUJ8 204 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 IGLV1-44P01699 117 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 ACSM4P0C7M7 580 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 TGM4P49221 684 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 CX3CR1P49238 355 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 PLP2Q04941 152 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 PPA1Q15181 289 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 SSX1Q16384 188 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 C1QTNF12Q5T7M4 302 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 FDX2Q6P4F2 183 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 FAM169BQ8N8A8 192 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 IL17RDQ8NFM7 739 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 OR2G2Q8NGZ5 317 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 PPP1R14AQ96A00 147 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 DOK1Q99704 481 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 FRRS1LQ9P0K9 344 aa18.67■□□□□ 0.58
TPM1-204ENST00000334895 LRRK2Q5S007 2527 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 IQCMA0A1B0GVH7 501 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 TMEM269A0A1B0GVZ9 245 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 C5orf63A6NC05 138 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 M0R135 149 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 OGG1O15527 345 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 SLC2A1P11166 492 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 KIR3DL2P43630 455 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 MMP16P51512 607 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 ZNF121P58317 390 aaPredicted RBP18.66■□□□□ 0.58
TPM1-204ENST00000334895 MRPL28Q13084 256 aaKnown RBP18.66■□□□□ 0.58
TPM1-204ENST00000334895 TPBGQ13641 420 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 SNTB1Q13884 538 aaKnown RBP18.66■□□□□ 0.58
TPM1-204ENST00000334895 CDK5R1Q15078 307 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 TSTQ16762 297 aaKnown RBP18.66■□□□□ 0.58
TPM1-204ENST00000334895 WDR38Q5JTN6 314 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 DMKNQ6E0U4 476 aaPredicted RBP18.66■□□□□ 0.58
TPM1-204ENST00000334895 CATSPERDQ86XM0 798 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 PAQR4Q8N4S7 273 aaPredicted RBP18.66■□□□□ 0.58
TPM1-204ENST00000334895 ZNF283Q8N7M2 679 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 OR13F1Q8NGS4 319 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 SPTSSAQ969W0 71 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 ZNF799Q96GE5 643 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 C4orf45Q96LM5 186 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 G6PC2Q9NQR9 355 aa18.66■□□□□ 0.58
TPM1-204ENST00000334895 NPDC1Q9NQX5 325 aaPredicted RBP18.66■□□□□ 0.58
TPM1-204ENST00000334895 ZNF829Q3KNS6 432 aaPredicted RBP18.65■□□□□ 0.58
TPM1-204ENST00000334895 CCDC58Q4VC31 144 aa18.65■□□□□ 0.58
TPM1-204ENST00000334895 LIPKQ5VXJ0 399 aa18.65■□□□□ 0.58
TPM1-204ENST00000334895 RPL22L1Q6P5R6 122 aaKnown RBP18.65■□□□□ 0.58
TPM1-204ENST00000334895 SLC30A7Q8NEW0 376 aa18.65■□□□□ 0.58
TPM1-204ENST00000334895 SSC4DQ8WTU2 575 aa18.65■□□□□ 0.58
TPM1-204ENST00000334895 MUCL1Q96DR8 90 aa18.65■□□□□ 0.58
TPM1-204ENST00000334895 WFIKKN1Q96NZ8 548 aa18.65■□□□□ 0.58
TPM1-204ENST00000334895 BRD7Q9NPI1 651 aa18.65■□□□□ 0.58
TPM1-204ENST00000334895 ZNF319Q9P2F9 582 aa18.65■□□□□ 0.58
TPM1-204ENST00000334895 SLC22A13Q9Y226 551 aa18.65■□□□□ 0.58
TPM1-204ENST00000334895 ICE1Q9Y2F5 2266 aa18.64■□□□□ 0.58
TPM1-204ENST00000334895 BAHCC1Q9P281 2608 aa18.64■□□□□ 0.58
TPM1-204ENST00000334895 IGHV1-18A0A0C4DH31 117 aa18.64■□□□□ 0.57
TPM1-204ENST00000334895 C5orf49A4QMS7 147 aa18.64■□□□□ 0.57
TPM1-204ENST00000334895 CECR9P0C854 216 aa18.64■□□□□ 0.57
TPM1-204ENST00000334895 CPEP16870 476 aa18.64■□□□□ 0.57
TPM1-204ENST00000334895 CELP19835 753 aa18.64■□□□□ 0.57
TPM1-204ENST00000334895 PAX7P23759 505 aa18.64■□□□□ 0.57
TPM1-204ENST00000334895 ZNF83P51522 516 aa18.64■□□□□ 0.57
TPM1-204ENST00000334895 TAS2R43P59537 309 aa18.64■□□□□ 0.57
TPM1-204ENST00000334895 ALKBH1Q13686 389 aaKnown RBP18.64■□□□□ 0.57
TPM1-204ENST00000334895 ALKBH2Q6NS38 261 aa18.64■□□□□ 0.57
TPM1-204ENST00000334895 PHC2Q8IXK0 858 aa18.64■□□□□ 0.57
TPM1-204ENST00000334895 HAVCR2Q8TDQ0 301 aa18.64■□□□□ 0.57
TPM1-204ENST00000334895 PGLYRP3Q96LB9 341 aa18.64■□□□□ 0.57
TPM1-204ENST00000334895 WIPF3A6NGB9 483 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 OR4C45A6NMZ5 311 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 LOC110117498-PIK3R3F6TDL0 507 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 PPP3CBP16298 524 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 APLNRP35414 380 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 TGFBR2P37173 567 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 RGS6P49758 472 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms