RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 HES1Q14469 280 aa13.52□□□□□ -0.25
C9orf47-201ENST00000334490 RGS7BPQ6MZT1 257 aaPredicted RBP13.52□□□□□ -0.25
C9orf47-201ENST00000334490 OR2G2Q8NGZ5 317 aa13.52□□□□□ -0.25
C9orf47-201ENST00000334490 SMIM19Q96E16 107 aa13.52□□□□□ -0.25
C9orf47-201ENST00000334490 FBXO17Q96EF6 278 aa13.52□□□□□ -0.25
C9orf47-201ENST00000334490 VSTM2LQ96N03 204 aa13.52□□□□□ -0.25
C9orf47-201ENST00000334490 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 IFNA4P05014 189 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 IL3RAP26951 378 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 PCSK6P29122 969 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 ALDH3B2P48448 385 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 GSG1Q2KHT4 349 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 KANSL1Q7Z3B3 1105 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 NRARPQ7Z6K4 114 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 PCM1Q15154 2024 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 HRKO00198 91 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 FOXS1O43638 330 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 FTH1P19P0C7X4 201 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 CD1EP15812 388 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 CD82P27701 267 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 FMODQ06828 376 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 CA5BP1Q8WTZ4 195 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 SDSLQ96GA7 329 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 OR2B2Q9GZK3 357 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 SIRT5Q9NXA8 310 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 TNFSF12O43508 249 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 PMP2P02689 132 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 DMRTC1Q5HYR2 192 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 MRGPREQ86SM8 312 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 C10orf90Q96M02 699 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 SMIM3Q9BZL3 60 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 RNF167Q9H6Y7 350 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 KIR2DS1A0A191URI9 304 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 OR2M5A3KFT3 312 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 FAM90A27PA6NNH2 459 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 SPDEFO95238 335 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 KIR2DS4P43632 304 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 DOC2BQ14184 412 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 KIR2DS1Q14954 304 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 ZNF764Q96H86 408 aaPredicted RBP13.51□□□□□ -0.25
C9orf47-201ENST00000334490 PSD2Q9BQI7 771 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 ZNF355PQ9NSJ1 428 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 PILRBQ9UKJ0 227 aa13.51□□□□□ -0.25
C9orf47-201ENST00000334490 ZNF705EA8MWA4 302 aaPredicted RBP13.5□□□□□ -0.25
C9orf47-201ENST00000334490 CPEP16870 476 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 OR4Q3Q8NH05 313 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 MLXQ9UH92 298 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 SLCO1B1Q9Y6L6 691 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 MYOFQ9NZM1 2061 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 A0A1W2PR80 420 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 HSPB2A8KAH6 182 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 SH2D1BO14796 132 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 GPX5O75715 221 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 EIF2S3P41091 472 aaKnown RBP13.5□□□□□ -0.25
C9orf47-201ENST00000334490 HSPB2Q16082 182 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 DCAF10Q5QP82 559 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 OGFOD3Q6PK18 319 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 ZDHHC23Q8IYP9 409 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 ZNF321PQ8N8H1 164 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 APOBEC3DQ96AK3 386 aaPredicted RBP13.5□□□□□ -0.25
C9orf47-201ENST00000334490 ZNF501Q96CX3 271 aaPredicted RBP13.5□□□□□ -0.25
C9orf47-201ENST00000334490 SIAEQ9HAT2 523 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 TMEM165Q9HC07 324 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 TCRBV16S1A1N1A0A5B0 115 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 B4E171 279 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 RPA2P15927 270 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 TSPAN7P41732 249 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 SLC37A1P57057 533 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 GAB4Q2WGN9 574 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 ZNF468Q5VIY5 522 aaPredicted RBP13.5□□□□□ -0.25
C9orf47-201ENST00000334490 SLC25A26Q70HW3 274 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 PRSS45Q7RTY3 260 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 SIAH3Q8IW03 269 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 PDZD9Q8IXQ8 264 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 DNASE2BQ8WZ79 361 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 MSI2Q96DH6 328 aaKnown RBP13.5□□□□□ -0.25
C9orf47-201ENST00000334490 SIRPB1O00241 398 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 PTPN6P29350 595 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 HAAOP46952 286 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 C21orf58P58505 322 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 TAF9Q16594 264 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.5□□□□□ -0.25
C9orf47-201ENST00000334490 LHFPL2Q6ZUX7 228 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 OR1F12Q8NHA8 337 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 GIMAP1Q8WWP7 306 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 S100PBPQ96BU1 408 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 UPRTQ96BW1 309 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 UBL7Q96S82 380 aaPredicted RBP13.5□□□□□ -0.25
C9orf47-201ENST00000334490 KCNJ15Q99712 375 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 JAM3Q9BX67 310 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 ISG20L2Q9H9L3 353 aaKnown RBP13.5□□□□□ -0.25
C9orf47-201ENST00000334490 QPCTLQ9NXS2 382 aa13.5□□□□□ -0.25
C9orf47-201ENST00000334490 SLC22A23A1A5C7 686 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 TUBG1P23258 451 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 SOX18P35713 384 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 MC2RQ01718 297 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 CD226Q15762 336 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 OR4D6Q8NGJ1 314 aa13.49□□□□□ -0.25
C9orf47-201ENST00000334490 PTPMT1Q8WUK0 201 aaPredicted RBP13.49□□□□□ -0.25
C9orf47-201ENST00000334490 GHRLQ9UBU3 117 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms