RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ZNF14P17017 642 aaPredicted RBP12.33□□□□□ -0.44
SYNE3-201ENST00000334258 NME2P22392 152 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 CPT2P23786 658 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 ERV3-1Q14264 604 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 KIR2DS3Q14952 304 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 SLC18B1Q6NT16 456 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 ETV3LQ6ZN32 361 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 MDGA2Q7Z553 956 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 TAF8Q7Z7C8 310 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 CA13Q8N1Q1 262 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 EXD3Q8N9H8 876 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 SLC30A7Q8NEW0 376 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 ROBO4Q8WZ75 1007 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 MRPL38Q96DV4 380 aaKnown RBP12.33□□□□□ -0.44
SYNE3-201ENST00000334258 KTI12Q96EK9 354 aaPredicted RBP12.33□□□□□ -0.44
SYNE3-201ENST00000334258 OR8B4Q96RC9 309 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 TEX13DA0A0J9YY54 714 aaPredicted RBP12.33□□□□□ -0.44
SYNE3-201ENST00000334258 A0A1B0GWJ7 208 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 RNASEK-C17orf49H0YIS7 233 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 PHYHO14832 338 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 SLC16A7O60669 478 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 CLN5O75503 358 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 MED6O75586 246 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 S100A8P05109 93 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 MAOAP21397 527 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 ABCD3P28288 659 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 IGFALSP35858 605 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 PPICP45877 212 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 RPS21P63220 83 aaKnown RBP12.33□□□□□ -0.44
SYNE3-201ENST00000334258 SRSF4Q08170 494 aaKnown RBP12.33□□□□□ -0.44
SYNE3-201ENST00000334258 SLC9A3R2Q15599 337 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 ZNF141Q15928 474 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 SSX2Q16385 188 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 ZNF542PQ5EBM4 170 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 TMEM184AQ6ZMB5 413 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 SLC29A4Q7RTT9 530 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 DEFB119Q8N690 84 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 ASB5Q8WWX0 329 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 TSACCQ96A04 125 aaPredicted RBP12.33□□□□□ -0.44
SYNE3-201ENST00000334258 RRNAD1Q96FB5 475 aaKnown RBP12.33□□□□□ -0.44
SYNE3-201ENST00000334258 GDE1Q9NZC3 331 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 GSKIPQ9P0R6 139 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 RCC2Q9P258 522 aaKnown RBP12.33□□□□□ -0.44
SYNE3-201ENST00000334258 TDRD6O60522 2096 aaKnown RBP12.32□□□□□ -0.44
SYNE3-201ENST00000334258 NUDT19A8MXV4 375 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 PMP2P02689 132 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 PNMTP11086 282 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 PRF1P14222 555 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 RNF4P78317 190 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 ACY1Q03154 408 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 HABP2Q14520 560 aaPredicted RBP12.32□□□□□ -0.44
SYNE3-201ENST00000334258 DEFB110Q30KQ9 67 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 OR2B11Q5JQS5 317 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 KRBOX4Q5JUW0 171 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 WBP2NLQ6ICG8 309 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 CBLN3Q6UW01 205 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 IL34Q6ZMJ4 242 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 MARCH3Q86UD3 253 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 ZNF679Q8IYX0 411 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 FAM174AQ8TBP5 190 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 MARCH1Q8TCQ1 289 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 METTL21AQ8WXB1 218 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 CLCC1Q96S66 551 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 SULT4A1Q9BR01 284 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 NUDT9Q9BW91 350 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 LPAR3Q9UBY5 353 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 FREM2Q5SZK8 3169 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 ZDBF2Q9HCK1 2354 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 PRSS38A1L453 326 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 APODP05090 189 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 ST6GAL1P15907 406 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 S1PR1P21453 382 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 GNALP38405 381 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 MFGE8Q08431 387 aaPredicted RBP12.32□□□□□ -0.44
SYNE3-201ENST00000334258 DMWDQ09019 674 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 ASPHD2Q6ICH7 369 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 NPSR1Q6W5P4 371 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 ZSCAN4Q8NAM6 433 aaPredicted RBP12.32□□□□□ -0.44
SYNE3-201ENST00000334258 PRR13Q9NZ81 148 aa12.32□□□□□ -0.44
SYNE3-201ENST00000334258 A0A0A6YYC8 382 aaPredicted RBP12.31□□□□□ -0.44
SYNE3-201ENST00000334258 ARGFXA6NJG6 315 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 I3L1I5 382 aaPredicted RBP12.31□□□□□ -0.44
SYNE3-201ENST00000334258 TERTO14746 1132 aaKnown RBP12.31□□□□□ -0.44
SYNE3-201ENST00000334258 FBXO24O75426 580 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 S100A10P60903 97 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 CYCSP99999 105 aaKnown RBP12.31□□□□□ -0.44
SYNE3-201ENST00000334258 METTL8Q9H825 291 aaKnown RBP12.31□□□□□ -0.44
SYNE3-201ENST00000334258 MSGN1A6NI15 193 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 COLCA2A8K830 154 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 K7EQS6 105 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 EFSO43281 561 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 LRP3O75074 770 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 DUS4LO95620 317 aaKnown RBP12.31□□□□□ -0.44
SYNE3-201ENST00000334258 NUDT14O95848 222 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 NR2C1P13056 603 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 PI3P19957 117 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 COL9A1P20849 921 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 ARRB1P49407 418 aaPredicted RBP12.31□□□□□ -0.44
SYNE3-201ENST00000334258 FABP9Q0Z7S8 132 aa12.31□□□□□ -0.44
SYNE3-201ENST00000334258 C10orf91Q5T1B1 145 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms