RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SRXN1Q9BYN0 137 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 SLC19A3Q9BZV2 496 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 B3GNT4Q9C0J1 378 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 AQP8O94778 261 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 LYPD3O95274 346 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 CPEP16870 476 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 IL32P24001 234 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 CEACAM16Q2WEN9 425 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 ABHD12BQ7Z5M8 362 aaPredicted RBP14.13□□□□□ -0.15
PDGFB-201ENST00000331163 TOMM5Q8N4H5 51 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 OR2V1Q8NHB1 315 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 MFSD8Q8NHS3 518 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 ANGPTL4Q9BY76 406 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 METTL17Q9H7H0 456 aaPredicted RBP14.13□□□□□ -0.15
PDGFB-201ENST00000331163 ASCL3Q9NQ33 180 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 RASD1Q9Y272 281 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 CENPEQ02224 2701 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 ASAH2BP0C7U1 165 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 PRSS45Q7RTY3 260 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 TRMT10AQ8TBZ6 339 aaKnown RBP14.12□□□□□ -0.15
PDGFB-201ENST00000331163 FAM46BQ96A09 425 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 ZNF837Q96EG3 531 aaPredicted RBP14.12□□□□□ -0.15
PDGFB-201ENST00000331163 SLITRK2Q9H156 845 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 KLHDC2Q9Y2U9 406 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 MAP1AP78559 2803 aaPredicted RBP14.12□□□□□ -0.15
PDGFB-201ENST00000331163 ZZEF1O43149 2961 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 P2RY10O00398 339 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 CALCBP10092 127 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 TEKQ02763 1124 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 SPOCK1Q08629 439 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 SNTB1Q13884 538 aaKnown RBP14.12□□□□□ -0.15
PDGFB-201ENST00000331163 GLB1L2Q8IW92 636 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 RADILQ96JH8 1075 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 PTDSS2Q9BVG9 487 aa14.12□□□□□ -0.15
PDGFB-201ENST00000331163 SLC22A23A1A5C7 686 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 SRD5A2P31213 254 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 RAC1P63000 192 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 VHLLQ6RSH7 139 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 ALKAL2Q6UX46 152 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 SLC16A14Q7RTX9 510 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 KCTD20Q7Z5Y7 419 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 OR5AK2Q8NH90 309 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 SLC25A43Q8WUT9 341 aaPredicted RBP14.11□□□□□ -0.15
PDGFB-201ENST00000331163 C11orf40Q8WZ69 217 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 FBXW5Q969U6 566 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 ABHD17AQ96GS6 310 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 PGAM5Q96HS1 289 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 DPAGT1Q9H3H5 408 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 RANBP3Q9H6Z4 567 aaPredicted RBP14.11□□□□□ -0.15
PDGFB-201ENST00000331163 ADGRL4Q9HBW9 690 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 FLVCR2Q9UPI3 526 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 MS4A18H0YCH9 400 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 ALDOBP05062 364 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 EIF4EP06730 217 aaKnown RBP14.11□□□□□ -0.15
PDGFB-201ENST00000331163 PIPP12273 146 aaPredicted RBP14.11□□□□□ -0.15
PDGFB-201ENST00000331163 HOXC12P31275 282 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 MS4A18Q3C1V0 323 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 MIB2Q96AX9 1013 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 ZBTB8AQ96BR9 441 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 MRPL39Q9NYK5 338 aaKnown RBP14.11□□□□□ -0.15
PDGFB-201ENST00000331163 CACNG2Q9Y698 323 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 TRAV17A0A0B4J275 112 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 RAD51DO75771 328 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 FARS2O95363 451 aaKnown RBP14.11□□□□□ -0.15
PDGFB-201ENST00000331163 CLN3Q13286 438 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 GRK1Q15835 563 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 ZNF782Q6ZMW2 699 aaPredicted RBP14.11□□□□□ -0.15
PDGFB-201ENST00000331163 DUSP18Q8NEJ0 188 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 STK35Q8TDR2 534 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 FUZQ9BT04 418 aa14.11□□□□□ -0.15
PDGFB-201ENST00000331163 SIRT4Q9Y6E7 314 aaPredicted RBP14.11□□□□□ -0.15
PDGFB-201ENST00000331163 K7EM74 188 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 PTGDSP41222 190 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 GTPBP8Q8N3Z3 284 aaPredicted RBP14.1□□□□□ -0.15
PDGFB-201ENST00000331163 GIMAP1Q8WWP7 306 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 SLC25A44Q96H78 314 aaPredicted RBP14.1□□□□□ -0.15
PDGFB-201ENST00000331163 NARS2Q96I59 477 aaKnown RBP14.1□□□□□ -0.15
PDGFB-201ENST00000331163 LINC00052Q96N35 136 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 DDOQ99489 341 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 ABHD6Q9BV23 337 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 SAV1Q9H4B6 383 aaPredicted RBP14.1□□□□□ -0.15
PDGFB-201ENST00000331163 A6NIZ1 184 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 SMAD9O15198 467 aaKnown RBP14.1□□□□□ -0.15
PDGFB-201ENST00000331163 MPC2O95563 127 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 HLA-HP01893 362 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 RAP1BP61224 184 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 RAP1AP62834 184 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 ACTC1P68032 377 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 ACTA1P68133 377 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 LGALSLQ3ZCW2 172 aaPredicted RBP14.1□□□□□ -0.15
PDGFB-201ENST00000331163 CD300LDQ6UXZ3 194 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 BOLLQ8N9W6 283 aaKnown RBP14.1□□□□□ -0.15
PDGFB-201ENST00000331163 OR10AC1Q8NH08 325 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 RBPMSQ93062 196 aaKnown RBP14.1□□□□□ -0.15
PDGFB-201ENST00000331163 TMEM106AQ96A25 262 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 OXGR1Q96P68 337 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 MAB21L2Q9Y586 359 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 LYZL6O75951 148 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 GABRA5P31644 462 aa14.1□□□□□ -0.15
PDGFB-201ENST00000331163 FAM122CQ6P4D5 195 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms