RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 OR10J5Q8NHC4 309 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 SDHAF2Q9NX18 166 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 A0A087WV62 115 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 IGHV1OR15-9A0A0B4J2B8 117 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 CNIH1O95406 144 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 SNCAP37840 140 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 MPLP40238 635 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 MYBPHQ13203 477 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 PDCD1Q15116 288 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 SYT6Q5T7P8 510 aaPredicted RBP9.22□□□□□ -0.93
CHD3-201ENST00000330494 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.22□□□□□ -0.93
CHD3-201ENST00000330494 CLDN22Q8N7P3 220 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 KCTD12Q96CX2 325 aaKnown RBP9.22□□□□□ -0.93
CHD3-201ENST00000330494 ARPC5LQ9BPX5 153 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 NDRG4Q9ULP0 352 aaKnown RBP9.22□□□□□ -0.93
CHD3-201ENST00000330494 UBL3O95164 117 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 CHRNB4P30926 498 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 ZNF121P58317 390 aaPredicted RBP9.22□□□□□ -0.93
CHD3-201ENST00000330494 SELENBP1Q13228 472 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 ACTBL2Q562R1 376 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 BARHL1Q9BZE3 327 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 PROCRQ9UNN8 238 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 ASPDHA6ND91 283 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 GPR137BO60478 399 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 ALOX5APP20292 161 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 SDHBP21912 280 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 DGCR2P98153 550 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 FAM53BQ14153 422 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 Q6ZNX1 250 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 RHOUQ7L0Q8 258 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 DOK3Q7L591 496 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 C1orf210Q8IVY1 113 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 ZNF683Q8IZ20 524 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 ZBTB44Q8NCP5 570 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 SLC25A46Q96AG3 418 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 ALG14Q96F25 216 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 FCRL1Q96LA6 429 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 ETV7Q9Y603 341 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 CCDC88CQ9P219 2028 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 A0A087WZY1 265 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 LRRC30A6NM36 301 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 CSF3P09919 207 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 DRD3P35462 400 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 BAMBIQ13145 260 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 NT5CQ8TCD5 201 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 OXGR1Q96P68 337 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 PLA2G12AQ9BZM1 189 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 PRDM7Q9NQW5 492 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 FBXO34Q9NWN3 711 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 H0Y8G0 127 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 TLE1Q04724 770 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 IL10RAQ13651 578 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 LAIR1Q6GTX8 287 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 OR1M1Q8NGA1 313 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 ST8SIA4Q92187 359 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 C14orf79Q96F83 325 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 CDX2Q99626 313 aaPredicted RBP9.21□□□□□ -0.93
CHD3-201ENST00000330494 NKX6-2Q9C056 277 aaPredicted RBP9.21□□□□□ -0.93
CHD3-201ENST00000330494 NARFLQ9H6Q4 476 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 SLC23A1Q9UHI7 598 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 KIF25Q9UIL4 384 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 TMEM235A6NFC5 223 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 KCNIP4Q6PIL6 250 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 LYSMD2Q8IV50 215 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 RIMKLAQ8IXN7 391 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 FAM185AQ8N0U4 392 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 GCNT2Q8N0V5 402 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 PLPPR2Q96GM1 343 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 C20orf24Q9BUV8 137 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 VN1R1Q9GZP7 353 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 ZNF768Q9H5H4 540 aaKnown RBP9.21□□□□□ -0.93
CHD3-201ENST00000330494 SBF2Q86WG5 1849 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 SPINT2O43291 252 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 SPRY1O43609 319 aaPredicted RBP9.21□□□□□ -0.93
CHD3-201ENST00000330494 GABARAPO95166 117 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 NRASP01111 189 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 ATP1B1P05026 303 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 EIF4EP06730 217 aaKnown RBP9.21□□□□□ -0.93
CHD3-201ENST00000330494 RBP2P50120 134 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 GNB2P62879 340 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 SLC35A2P78381 396 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 INSM1Q01101 510 aaPredicted RBP9.21□□□□□ -0.93
CHD3-201ENST00000330494 AARDQ4LEZ3 155 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 NKAIN3Q8N8D7 197 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 EXD3Q8N9H8 876 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 OR6M1Q8NGM8 313 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 TAS2R5Q9NYW4 299 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 PURGQ9UJV8 347 aaKnown RBP9.21□□□□□ -0.93
CHD3-201ENST00000330494 TIMM10BQ9Y5J6 103 aa9.21□□□□□ -0.93
CHD3-201ENST00000330494 SLC22A20A6NK97 555 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 TO15178 435 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 NME1P15531 152 aaKnown RBP9.21□□□□□ -0.94
CHD3-201ENST00000330494 GPR3P46089 330 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 FCRL6Q6DN72 434 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 TPPP3Q9BW30 176 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 RTL8AQ9BWD3 113 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 PBOV1Q9GZY1 135 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 S1PR5Q9H228 398 aa9.21□□□□□ -0.94
CHD3-201ENST00000330494 PTPRZ1P23471 2315 aaPredicted RBP9.21□□□□□ -0.94
CHD3-201ENST00000330494 MGST1P10620 155 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms