RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 GALNT16Q8N428 558 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 PAQR4Q8N4S7 273 aaPredicted RBP12.92□□□□□ -0.34
TPM3-206ENST00000330188 ACBD4Q8NC06 268 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 OR2AJ1Q8NGZ0 328 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 ZBTB8AQ96BR9 441 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 IMMP1LQ96LU5 166 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 CHST6Q9GZX3 395 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 CLEC4MQ9H2X3 399 aaPredicted RBP12.92□□□□□ -0.34
TPM3-206ENST00000330188 SLCO5A1Q9H2Y9 848 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 EXO5Q9H790 373 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 RAB22AQ9UL26 194 aa12.92□□□□□ -0.34
TPM3-206ENST00000330188 LINC00862A6NCI5 91 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 TMEM235A6NFC5 223 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 WIPF3A6NGB9 483 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 LEUTXA8MZ59 168 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 PATE3B3GLJ2 98 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 M0QYG6 137 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 NTN3O00634 580 aaPredicted RBP12.91□□□□□ -0.34
TPM3-206ENST00000330188 COX6A1P12074 109 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 CAPZA1P52907 286 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 UNC119Q13432 240 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 GRK1Q15835 563 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 Q7L0L9 218 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 CDH26Q8IXH8 852 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 TMPRSS13Q9BYE2 586 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 B3GNT4Q9C0J1 378 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 TINAGL1Q9GZM7 467 aaPredicted RBP12.91□□□□□ -0.34
TPM3-206ENST00000330188 ZNF700Q9H0M5 742 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 MOB1AQ9H8S9 216 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 TMEM138Q9NPI0 162 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 PRDM6Q9NQX0 595 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 KLK13Q9UKR3 277 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 PTRH2Q9Y3E5 179 aaKnown RBP12.91□□□□□ -0.34
TPM3-206ENST00000330188 LOC102725191A0A1B0GVB3 256 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 SULT2B1O00204 365 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 PDGFBP01127 241 aaPredicted RBP12.91□□□□□ -0.34
TPM3-206ENST00000330188 IFNA7P01567 189 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 QDPRP09417 244 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 ZNF735P0CB33 412 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 CCL4P13236 92 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 ZNF24P17028 368 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 CXCL2P19875 107 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 FKBP2P26885 142 aaKnown RBP12.91□□□□□ -0.34
TPM3-206ENST00000330188 UBE2MP61081 183 aaKnown RBP12.91□□□□□ -0.34
TPM3-206ENST00000330188 QRFPP83859 136 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 CLPPQ16740 277 aaPredicted RBP12.91□□□□□ -0.34
TPM3-206ENST00000330188 PEAR1Q5VY43 1037 aaPredicted RBP12.91□□□□□ -0.34
TPM3-206ENST00000330188 TMEM81Q6P7N7 255 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 SLC22A24Q8N4F4 322 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 OR2AK2Q8NG84 335 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 OR51E1Q8TCB6 317 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 AQP3Q92482 292 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 MR1Q95460 341 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 NKD1Q969G9 470 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 UQCC2Q9BRT2 126 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 PNRC2Q9NPJ4 139 aaKnown RBP12.91□□□□□ -0.34
TPM3-206ENST00000330188 ASH2LQ9UBL3 628 aa12.91□□□□□ -0.34
TPM3-206ENST00000330188 ZNF107Q9UII5 783 aaPredicted RBP12.91□□□□□ -0.34
TPM3-206ENST00000330188 RAB27BO00194 218 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 KLF7O75840 302 aaPredicted RBP12.9□□□□□ -0.34
TPM3-206ENST00000330188 SIX6O95475 246 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 BPNT1O95861 308 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 CYB5AP00167 134 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 CFDP00746 253 aaPredicted RBP12.9□□□□□ -0.34
TPM3-206ENST00000330188 CD74P04233 296 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 KLK3P07288 261 aaPredicted RBP12.9□□□□□ -0.34
TPM3-206ENST00000330188 ENPP1P22413 925 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 H2BFSP57053 126 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 GABREP78334 506 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 SLC35A1P78382 337 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 ZFP36L1Q07352 338 aaKnown RBP12.9□□□□□ -0.34
TPM3-206ENST00000330188 EXT1Q16394 746 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 KCNMB1Q16558 191 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 ZNF260Q3ZCT1 412 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 TMPPEQ6ZT21 453 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 RHOUQ7L0Q8 258 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 GTPBP8Q8N3Z3 284 aaPredicted RBP12.9□□□□□ -0.34
TPM3-206ENST00000330188 AGBL5Q8NDL9 886 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 OR5D14Q8NGL3 314 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 OR13C9Q8NGT0 318 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 ALX4Q9H161 411 aaPredicted RBP12.9□□□□□ -0.34
TPM3-206ENST00000330188 POFUT1Q9H488 388 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 OPN4Q9UHM6 478 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 HS3ST3B1Q9Y662 390 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 WDFY3Q8IZQ1 3526 aa12.9□□□□□ -0.34
TPM3-206ENST00000330188 MED12Q93074 2177 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 A0A087WZY1 265 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 TEX51A0A1B0GUA7 166 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 RPS10-NUDT3A0A1W2PQS6 291 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 METTL21EPA6NDL7 271 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 ZNF726A6NNF4 738 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 M0R233 179 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 GOSR2O14653 212 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 RER1O15258 196 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 AMY2AP04746 511 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 RAB3AP20336 220 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 ANOS1P23352 680 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 PRKXP51817 358 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms