RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CLVS2Q5SYC1 327 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 PRAMEF20Q5VT98 475 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 FNDC7Q5VTL7 733 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 ATRAIDQ6UW56 229 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 HOXB13Q92826 284 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 EXOSC3Q9NQT5 275 aaKnown RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 PCDH15Q96QU1 1955 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 IGLV1-36A0A0B4J1U3 117 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 SDCBPO00560 298 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 DUX1O43812 170 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 B3GALNT1O75752 331 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 ZNF93P35789 620 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 FOXF1Q12946 379 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 RTN4RL2Q86UN3 420 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 CATSPERDQ86XM0 798 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 BVESQ8NE79 360 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 WNT2BQ93097 391 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 ADIPOR1Q96A54 375 aa11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 PRMT8Q9NR22 394 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 ZNF701Q9NV72 531 aaPredicted RBP11.53□□□□□ -0.56
HMGCS1-201ENST00000325110 CLPSP04118 112 aa11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 RAB3AP20336 220 aa11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 EPHA4P54764 986 aa11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 AIMP2Q13155 320 aaKnown RBP11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 ZNF169Q14929 603 aaPredicted RBP11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 OR4K15Q8NH41 348 aa11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 OR1S1Q8NH92 325 aa11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 C11orf40Q8WZ69 217 aa11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 DMRTA2Q96SC8 542 aa11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 ACKR4Q9NPB9 350 aa11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 ZNF275Q9NSD4 429 aaPredicted RBP11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 ASH2LQ9UBL3 628 aa11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 VSIG4Q9Y279 399 aa11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 SPTBN5Q9NRC6 3674 aaKnown RBP11.52□□□□□ -0.56
HMGCS1-201ENST00000325110 TRBV11-1A0A0K0K1C0 115 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF878C9JN71 531 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 TOR1AO14656 332 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF208O43345 1280 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 UBBP0CG47 229 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 UBCP0CG48 685 aaKnown RBP11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 FASLGP48023 281 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 CCR5P51681 352 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 DCAF7P61962 342 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 RPS27AP62979 156 aaKnown RBP11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 UBA52P62987 128 aaKnown RBP11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 INPP5JQ15735 1006 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 C14orf28Q4W4Y0 310 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 GLIPR1L1Q6UWM5 242 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 H1FNTQ75WM6 255 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 PLXDC1Q8IUK5 500 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 GTPBP8Q8N3Z3 284 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 TMEM229BQ8NBD8 167 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 STT3BQ8TCJ2 826 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 NICN1Q9BSH3 213 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 GDF2Q9UK05 429 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 A0A1W2PP11 408 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 F5H5K5 113 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 HOXB5P09067 269 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 DAP3P51398 398 aaKnown RBP11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 NKAPLQ5M9Q1 402 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 FAM57BQ71RH2 274 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 OR5D14Q8NGL3 314 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 OR1N1Q8NGS0 311 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 SLC25A28Q96A46 364 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 FOXRED1Q96CU9 486 aaPredicted RBP11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 TMPRSS13Q9BYE2 586 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 SDHAF3Q9NRP4 125 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 HPF1Q9NWY4 346 aa11.52□□□□□ -0.57
HMGCS1-201ENST00000325110 G3V3Y1 287 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 NME1P15531 152 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 AMY2BP19961 511 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 MEF2DQ14814 521 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 ASPHD2Q6ICH7 369 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 TMEM17Q86X19 198 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 ADAD2Q8NCV1 583 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 SLC26A10Q8NG04 563 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 TMED6Q8WW62 240 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 ADAT3Q96EY9 351 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 CHMP1AQ9HD42 196 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 HRH3Q9Y5N1 445 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 KNTC1P50748 2209 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 A0A0D9SG52 128 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF726A6NNF4 738 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF705EA8MWA4 302 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 NAGAP17050 411 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 SERPINF1P36955 418 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 C11orf87Q6NUJ2 197 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 OR1M1Q8NGA1 313 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 OR5M8Q8NGP6 311 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 MARVELD3Q96A59 401 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 SOX7Q9BT81 388 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 ADAT1Q9BUB4 502 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 WDR13Q9H1Z4 485 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 C1orf198Q9H425 327 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 CSAG2Q9Y5P2 127 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 DENND4AQ7Z401 1863 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 A6NIZ1 184 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 METTL12A8MUP2 240 aa11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 FARS2O95363 451 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-201ENST00000325110 SCGB1D2O95969 90 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms