RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 HDHD5Q9BXW7 423 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 ACTR6Q9GZN1 396 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 RBM38Q9H0Z9 239 aaKnown RBP13.29□□□□□ -0.28
PRPF3-201ENST00000324862 G6PC2Q9NQR9 355 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 SLC17A5Q9NRA2 495 aa13.29□□□□□ -0.28
PRPF3-201ENST00000324862 ERRFI1Q9UJM3 462 aaPredicted RBP13.29□□□□□ -0.28
PRPF3-201ENST00000324862 CCDC160A6NGH7 325 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 GDI2P50395 445 aaKnown RBP13.28□□□□□ -0.28
PRPF3-201ENST00000324862 PCBD1P61457 104 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 TAB1Q15750 504 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 SLC16A12Q6ZSM3 486 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 SYT9Q86SS6 491 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 RGP1Q92546 391 aaPredicted RBP13.28□□□□□ -0.28
PRPF3-201ENST00000324862 ORAI1Q96D31 301 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 ZC3HAV1LQ96H79 300 aaKnown RBP13.28□□□□□ -0.28
PRPF3-201ENST00000324862 OR51B6Q9H340 312 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 NDUFB11Q9NX14 153 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 R4GMQ9 66 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 MYO18BQ8IUG5 2567 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 LOC100506127A0A0U1RQW1 187 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 A0A1W2PPK0 400 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 OR5H1A6NKK0 313 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 GPX5O75715 221 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 PSMB1P20618 241 aaKnown RBP13.28□□□□□ -0.28
PRPF3-201ENST00000324862 CHRNB4P30926 498 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 UGT2B10P36537 528 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 ALKBH1Q13686 389 aaKnown RBP13.28□□□□□ -0.28
PRPF3-201ENST00000324862 GFOD2Q3B7J2 385 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 SNAI3Q3KNW1 292 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 RPL22L1Q6P5R6 122 aaKnown RBP13.28□□□□□ -0.28
PRPF3-201ENST00000324862 FAM57BQ71RH2 274 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 SMIM19Q96E16 107 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 C4orf45Q96LM5 186 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 KCNJ15Q99712 375 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 CHCHD6Q9BRQ6 235 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 HDHD2Q9H0R4 259 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 COQ3Q9NZJ6 369 aa13.28□□□□□ -0.28
PRPF3-201ENST00000324862 FAM208BQ5VWN6 2430 aa13.27□□□□□ -0.28
PRPF3-201ENST00000324862 C5orf49A4QMS7 147 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 OR4C45A6NMZ5 311 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 LOC110117498-PIK3R3F6TDL0 507 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 M0R135 149 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 OGG1O15527 345 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 PLPP2O43688 288 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 ZNF254O75437 659 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 UBL3O95164 117 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 ANXA2P07355 339 aaKnown RBP13.27□□□□□ -0.29
PRPF3-201ENST00000324862 STOMP27105 288 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 FABP5Q01469 135 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 FAM27D1Q5T7N8 215 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 DEGS2Q6QHC5 323 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 PRSS45Q7RTY3 260 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 CATSPERDQ86XM0 798 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 ZNF799Q96GE5 643 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 DOK1Q99704 481 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 CENPOQ9BU64 300 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 OR52A1Q9UKL2 312 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 HOXC12P31275 282 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 OTX1P32242 354 aaPredicted RBP13.27□□□□□ -0.29
PRPF3-201ENST00000324862 PSMA6P60900 246 aaKnown RBP13.27□□□□□ -0.29
PRPF3-201ENST00000324862 RPS11P62280 158 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRPF3-201ENST00000324862 ALDH16A1Q8IZ83 802 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 C1orf162Q8NEQ5 155 aaPredicted RBP13.27□□□□□ -0.29
PRPF3-201ENST00000324862 CA5BP1Q8WTZ4 195 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 MRPL48Q96GC5 212 aaKnown RBP13.27□□□□□ -0.29
PRPF3-201ENST00000324862 PBOV1Q9GZY1 135 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 NPAP1Q9NZP6 1156 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 SLC25A15Q9Y619 301 aa13.27□□□□□ -0.29
PRPF3-201ENST00000324862 A6NIN4 97 aa13.26□□□□□ -0.29
PRPF3-201ENST00000324862 ACSM4P0C7M7 580 aa13.26□□□□□ -0.29
PRPF3-201ENST00000324862 ZNF14P17017 642 aaPredicted RBP13.26□□□□□ -0.29
PRPF3-201ENST00000324862 ARR3P36575 388 aa13.26□□□□□ -0.29
PRPF3-201ENST00000324862 CRYBB2P43320 205 aa13.26□□□□□ -0.29
PRPF3-201ENST00000324862 NCS1P62166 190 aa13.26□□□□□ -0.29
PRPF3-201ENST00000324862 C4orf17Q53FE4 359 aa13.26□□□□□ -0.29
PRPF3-201ENST00000324862 P2RY8Q86VZ1 359 aa13.26□□□□□ -0.29
PRPF3-201ENST00000324862 ZNF101Q8IZC7 436 aa13.26□□□□□ -0.29
PRPF3-201ENST00000324862 OR8B12Q8NGG6 310 aa13.26□□□□□ -0.29
PRPF3-201ENST00000324862 OR2AE1Q8NHA4 323 aa13.26□□□□□ -0.29
PRPF3-201ENST00000324862 PPIL3Q9H2H8 161 aaKnown RBP13.26□□□□□ -0.29
PRPF3-201ENST00000324862 SLC24A3Q9HC58 644 aa13.26□□□□□ -0.29
PRPF3-201ENST00000324862 EXOSC4Q9NPD3 245 aaKnown RBP13.26□□□□□ -0.29
PRPF3-201ENST00000324862 ISYNA1Q9NPH2 558 aa13.26□□□□□ -0.29
PRPF3-201ENST00000324862 A0A1B0GUH1 482 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 ANKRD61A6NGH8 418 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 P2RY10O00398 339 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 LMX1BO60663 402 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 NGFP01138 241 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 TTRP02766 147 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 TGM4P49221 684 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 MMP16P51512 607 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 VBP1P61758 197 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 GRB2P62993 217 aaKnown RBP13.25□□□□□ -0.29
PRPF3-201ENST00000324862 BDH1Q02338 343 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 CTF1Q16619 201 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 TMEM53Q6P2H8 277 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 RHOUQ7L0Q8 258 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 NANOS1Q8WY41 292 aaKnown RBP13.25□□□□□ -0.29
PRPF3-201ENST00000324862 POM121L2Q96KW2 1035 aa13.25□□□□□ -0.29
PRPF3-201ENST00000324862 C16orf97H3BN30 126 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms