RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 RRNAD1Q96FB5 475 aaKnown RBP13.29□□□□□ -0.28
TCOF1-201ENST00000323668 SMCO4Q9NRQ5 59 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 KLF15Q9UIH9 416 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 CEP290O15078 2479 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 STMND1H3BQB6 276 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 SHOXO15266 292 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 DCDP81605 110 aaKnown RBP13.28□□□□□ -0.28
TCOF1-201ENST00000323668 TOMM34Q15785 309 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-201ENST00000323668 THEM4Q5T1C6 240 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 B3GNTL1Q67FW5 361 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-201ENST00000323668 ESX1Q8N693 406 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 DTWD2Q8NBA8 298 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 SUMF2Q8NBJ7 301 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 ZNF775Q96BV0 537 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-201ENST00000323668 GPR84Q9NQS5 396 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 WDR90Q96KV7 1748 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 SDCBPO00560 298 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-201ENST00000323668 OR7C1O76099 320 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-201ENST00000323668 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 RFLNBQ8N5W9 214 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 TERB2Q8NHR7 220 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 PIGTQ969N2 578 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 DBHP09172 617 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 ECI1P42126 302 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 DUSP3P51452 185 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-201ENST00000323668 SLC38A6Q8IZM9 456 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 CLRN3Q8NCR9 226 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 TCEAL7Q9BRU2 100 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 PCOLCE2Q9UKZ9 415 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 LOC102725191A0A1B0GVB3 256 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 EPPINO95925 133 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 ZNF728P0DKX0 622 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 GABRG2P18507 467 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 COL9A1P20849 921 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 AFF3P51826 1226 aaKnown RBP13.28□□□□□ -0.28
TCOF1-201ENST00000323668 TMEM88Q6PEY1 159 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 HSD17B13Q7Z5P4 300 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-201ENST00000323668 LINC00052Q96N35 136 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 PFDN5Q99471 154 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 KCNS2Q9ULS6 477 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 CHD5Q8TDI0 1954 aa13.28□□□□□ -0.28
TCOF1-201ENST00000323668 TRAV8-7A0A075B6U6 113 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 A0A0B4J293 547 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 OR6C76A6NM76 312 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 ALOX12BO75342 701 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 RECKO95980 971 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 CD1AP06126 327 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 GSTP1P09211 210 aaKnown RBP13.27□□□□□ -0.28
TCOF1-201ENST00000323668 TMEM164Q5U3C3 297 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 OR52W1Q6IF63 320 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 ZNF709Q8N972 641 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 STT3BQ8TCJ2 826 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 C1QTNF6Q9BXI9 259 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 WWTR1Q9GZV5 400 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 PTRH2Q9Y3E5 179 aaKnown RBP13.27□□□□□ -0.28
TCOF1-201ENST00000323668 PCDHGA1Q9Y5H4 931 aa13.27□□□□□ -0.28
TCOF1-201ENST00000323668 HRKO00198 91 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 SGCEO43556 437 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 SERPINE2P07093 398 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 POU2F2P09086 479 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 CD226Q15762 336 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 NKAIN1Q4KMZ8 207 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 Q5BKY6 102 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 ATG4DQ86TL0 474 aaPredicted RBP13.27□□□□□ -0.29
TCOF1-201ENST00000323668 OR10Z1Q8NGY1 313 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 GPR119Q8TDV5 335 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 SLC25A43Q8WUT9 341 aaPredicted RBP13.27□□□□□ -0.29
TCOF1-201ENST00000323668 PIGCQ92535 297 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 SLAMF9Q96A28 289 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 CYB5R1Q9UHQ9 305 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 TAAR5O14804 337 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 RPA2P15927 270 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 NANOS3P60323 173 aaKnown RBP13.27□□□□□ -0.29
TCOF1-201ENST00000323668 CDC20BQ86Y33 519 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 OR11G2Q8NGC1 345 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 OR11H4Q8NGC9 324 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 OR10AC1Q8NH08 325 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 CXorf58Q96LI9 332 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 DICER1Q9UPY3 1922 aaKnown RBP13.27□□□□□ -0.29
TCOF1-201ENST00000323668 BCAT2O15382 392 aaPredicted RBP13.27□□□□□ -0.29
TCOF1-201ENST00000323668 DPP4P27487 766 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 CHATP28329 748 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 EPHA4P54764 986 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 TMEM128Q5BJH2 165 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 ZDHHC22Q8N966 263 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 SLC25A31Q9H0C2 315 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 TMEM231Q9H6L2 316 aa13.27□□□□□ -0.29
TCOF1-201ENST00000323668 ZSWIM8A7E2V4 1837 aa13.26□□□□□ -0.29
TCOF1-201ENST00000323668 IFNA1P01562 189 aa13.26□□□□□ -0.29
TCOF1-201ENST00000323668 TK1P04183 234 aa13.26□□□□□ -0.29
TCOF1-201ENST00000323668 QDPRP09417 244 aa13.26□□□□□ -0.29
TCOF1-201ENST00000323668 CTLA4P16410 223 aa13.26□□□□□ -0.29
TCOF1-201ENST00000323668 FIP1L1Q6UN15 594 aaKnown RBP13.26□□□□□ -0.29
TCOF1-201ENST00000323668 OR6C1Q96RD1 312 aa13.26□□□□□ -0.29
TCOF1-201ENST00000323668 GABRG3Q99928 467 aa13.26□□□□□ -0.29
TCOF1-201ENST00000323668 ZNF175Q9Y473 711 aa13.26□□□□□ -0.29
TCOF1-201ENST00000323668 LILRA5A6NI73 299 aa13.26□□□□□ -0.29
TCOF1-201ENST00000323668 B3GALNT1O75752 331 aa13.26□□□□□ -0.29
TCOF1-201ENST00000323668 TUBG1P23258 451 aa13.26□□□□□ -0.29
TCOF1-201ENST00000323668 GGTLC2Q14390 218 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms