RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 LILRB2Q8N423 598 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 FBXO17Q96EF6 278 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 EMC6Q9BV81 110 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 MED29Q9NX70 200 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 ZNF629Q9UEG4 869 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 RALGAPA1Q6GYQ0 2036 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 BCL2L11O43521 198 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 ANXA2P07355 339 aaKnown RBP13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 ADAM8P78325 824 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 NR0B2Q15466 257 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 AVPI1Q5T686 147 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 C1orf140Q5VVS0 124 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 RAB12Q6IQ22 244 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 CORO6Q6QEF8 472 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 MAMDC2Q7Z304 686 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 SPEM1Q8N4L4 309 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 SLC22A8Q8TCC7 542 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 MRPL48Q96GC5 212 aaKnown RBP13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 ADAM19Q9H013 955 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 STEAP1Q9UHE8 339 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 TRAV36DV7A0A075B6V5 113 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 ALG1L2C9J202 215 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 XRCC3O43542 346 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 FADS1O60427 444 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 FAUP35544 74 aaKnown RBP13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 ATP1B3P54709 279 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 PHF19Q5T6S3 580 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 KRT77Q7Z794 578 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 OR2G2Q8NGZ5 317 aa13.91□□□□□ -0.18
SHROOM1-201ENST00000319854 TRAV18A0A075B6X5 111 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 TRBV11-1A0A0K0K1C0 115 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 CFIP05156 583 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 ZNF806P0C7X5 589 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 CSRP1P21291 193 aaKnown RBP13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 LIN54Q6MZP7 749 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 UQCC3Q6UW78 93 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 LRRTM1Q86UE6 522 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 OR51D1Q8NGF3 324 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 PAQR8Q8TEZ7 354 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 FRYQ5TBA9 3013 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 PHF3Q92576 2039 aaKnown RBP13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 RAB19A4D1S5 217 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 M0QYG6 137 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 SCRG1O75711 98 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 BGLAPP02818 100 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 MNDAP41218 407 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 NKAIN1Q4KMZ8 207 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 C11orf87Q6NUJ2 197 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 OR4A4PQ8NGN8 299 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 OR1J2Q8NGS2 313 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 MVB12AQ96EY5 273 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 SLC41A2Q96JW4 573 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 GPX7Q96SL4 187 aaPredicted RBP13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 NIT2Q9NQR4 276 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 ZFP57Q9NU63 452 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 KLRF1Q9NZS2 232 aa13.9□□□□□ -0.18
SHROOM1-201ENST00000319854 GPRIN2O60269 458 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 AHSA1O95433 338 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 CD8AP01732 235 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 IFNA4P05014 189 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 AKAIN1P0CW23 69 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 ALOX5APP20292 161 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 SLC6A8P48029 635 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 HABP2Q14520 560 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 Q499Y3 187 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 C10orf91Q5T1B1 145 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 SPAG16Q8N0X2 631 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 PRSS35Q8N3Z0 413 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 EXD3Q8N9H8 876 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 C5orf34Q96MH7 638 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 C1orf198Q9H425 327 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 COA3Q9Y2R0 106 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 CEP192Q8TEP8 1941 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 GGT3PA6NGU5 568 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 ITGB2P05107 769 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 DLSTP36957 453 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 CCL7P80098 99 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 INSM1Q01101 510 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 LCN10Q6JVE6 187 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 COX15Q7KZN9 410 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 CDC20BQ86Y33 519 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 WDFY1Q8IWB7 410 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 PLPP7Q8NBV4 271 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 PPP1R1CQ8WVI7 109 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 EDARADDQ8WWZ3 215 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 SLITRK2Q9H156 845 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 GPN3Q9UHW5 284 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 SIT1Q9Y3P8 196 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 A0A1B0GTQ1 180 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 F5H0A9 414 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 CTAG2O75638 210 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 PNPP00491 289 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 PDGFBP01127 241 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 CD1AP06126 327 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 CSF1P09603 554 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 AGTR1P30556 359 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 SHBQ15464 509 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 WDR38Q5JTN6 314 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 STEAP1BQ6NZ63 245 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 PAPD4Q6PIY7 484 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms